Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0251 ATGAGCGAAGAGGACAACTTCGAGAAAGGCAGAGACTTCTCCAGCCAACAACATCCCTCTGCGCCACCCCTCTACGGCACATTCCAACCCCACTCCAACCCTCCTCCTCCTCCGCCGGAACCACAGCCTCCGACTGGCTTCCCTCAACCTGTTCCGCCGCCGGGCTCCGTCGAGCCCCCTCCTCCTCGTCCTCAGTATTATGGTCAGGGCTACCAAGCCGTTCCCGGATATCCAGTTGCTGAAGGAAGACCTGTCAGAGAACGCCGCCTCCGGTGCTGTGGTATCGGCTGCGGCTGGTGCCTGTTTATATTAGGTTTTTTGCTAGTCGCTATCCCATGGTTTGTTGGGGCAATAATTCTGCTCTGTTCCAGAATAGACTACCGAGAGAAACCTGGATTCATTGCATGTACTATTGCTGCTGGTATCGCTACTATTGCCATAATTGTTGGTGCATCAAAGGGAGCAAATATGTGGTAA 477 0.5388 MSEEDNFEKGRDFSSQQHPSAPPLYGTFQPHSNPPPPPPEPQPPTGFPQPVPPPGSVEPPPPRPQYYGQGYQAVPGYPVAEGRPVRERRLRCCGIGCGWCLFILGFLLVAIPWFVGAIILLCSRIDYREKPGFIACTIAAGIATIAIIVGASKGANMW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0251 158 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 158 IPR044804 -
Dere08g0251 158 MobiDBLite consensus disorder prediction 13 27 - -
Dere08g0251 158 MobiDBLite consensus disorder prediction 28 66 - -
Dere08g0251 158 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0251 Dere-ChrDere08 4574709 4576634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0251 1 158 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 33.971 5.05e-22 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0251 08 4574709 4576634 Dere08g0251 08 4574709 4576634 ECH