Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0250 ATGGATATAACGGAAATTTCAATCTTGCATCATGTGGGCATTGTGCTTCTGGGGCTTTGGTTGCTATCTGCCTACAACTGGTGCCAACCGGTTGCTTATTTTGTAGCCCTGATCTATCTCTATCTGGTTCATGAACGTTATGTCACGAGACTGCGGAAGAAGTTACAGTTCGAGGAGAAGAAACAAGCAAATCAAAGAAGGGTGCTTTCTGATTCCGAAACATTAAGGTGGTTGAACCATGCAGTTGAAAACATATGGCCCATATGTATGGAACAGATTGCCTCTCAGAAGATTTTGCTCCCCATCATACCTTGGTTCCTAGAGAAGTACAAACCTTGGACTGCTAAAAAAGCCATTGTTCAGCACCTGTACCTGGGAAGAAACCCCCCTTTGTTTACCGAAATAAGGGTGCTCCGCCAAAGTAATGATGACCACTTGGTTCTGGAGTTGGGAATGAATTTTCTCACAGCCGATGATATGAGTGCAATACTAGCTGTGAAACTAAGGAAAAGATTAGGCTTTGGGATGTGGGCAAAGCTGCACATAACGGGTATGCATGTTGAAGGGAAGGTTTTGGTTGGAGTAAAATTTCGCCAAACATGGCCTTTCCTTAGTCGTTTACGGGTATGCTTTGTTGAACCCCCATACTTTCAAATGACTGTCAAGCCTATATTTACTCATGGGCTTGATGTGACAGAAGTTCCTGGGATTGCTGGATGGCTAGATAAGCTCTTGTCTATTGCATTCGAGCAGACTCTTGTCGAGCCTAATATGCTGGTTGTTGATGTTGAGAAATTTGCTTCACCACAGCCAGAGTCTTGGTTCACCGTCAATGAGAAGGACCCTGTTGCTTATGCCCATGTAGAAGTTGTTGAAGCATCTGACATGAAGCCATCAGATCTAAATGGACTAGCGGATCCATATGTAAAAGGTCATGTGGGTGGCTATAGATTCAGGACTAAGACACAAAGGAAAACACTTACTCCTAAATGGCATGAAGAATTCAGAGTTCCCATCATATCATGGGCGTGTAGCAATGTGTTGGCTATTGAAGTTTGTGACAAGGACCATTTCTATGATGATAACCTTGGAGACTGTTCTGTGAACCTAAGTGATTTGAGGGATGGCCAGAGACATGATATGTGGTTGCCACTTCAGAACATCAAAACAGGGAGGTTGCACCTGGCAATAACTATTTCTGAAGACAAAGCAAAGGGAGTTGATAATACATTTAACCAGGAAACAGAGGATGCTGAACAAAAACGGAATTCCTTTACAAACGAGACTTCTAATAAAAGTTCTTTCTCATCTGTTTCGTCAGAAAAATCCCAAAAAGTTGAGGATAACTATGAGCCTATAGATGTTGAAGGGCAAAAGGAGACTGGAATTTGGGTTCATCACCCAGGCAGTGAAGTTTCCCAAACATGGGAACCTAGGAAAGGGAAGAGTCGACGCCCTGATACTGAAATTCTCAGGGAGCCTAATGATTTATATGGCAGTTTTAATTCAACAGTATCTGGATTGTTGAACAATGACTGCAGCAGTCCTGATGATAACCCGGAGGGTAAGCATCGAATGAAAATAGTTAGGAGGGGACTGCACAAGATTGGGTCAGTTTTTAGAAGGGGCTCAAAGAAGGAGCCTCCAACACCAACATCAACAGGAAGTACTAGAGAGGCTATTCTGTCTCCCCGTGTTAACATTAAGGCAGTGAATGCCAAGGAGATTGGTGTGAAGTTCATTATGGAGGATAACATTTCTGGGTTCCCCTCTGGCAAGGTTCACAAAGAAGGGACATCCACTGAAAGCAGTGGTCCAGAGAGCCCAAACAAGGGACATGTCAAGGATATGGCAAAGAATATTATGAAGCATGCAGAGAAATCAGCACGTGGCCTGAAGCATGTGCTTTCCTGTAAATCAAGAAAATTTGAAGGTGACTCACCAGGAGTTCGAGAAACAGAAATCCTAAAAGAATCTGACTCTTCTGATGTTGATTCCCTTCCAGTTCAGTCCCCCGGAGATGAAAGAATTCCCGTTGCTTCCAAGTTCATTGCTTCTTTTAGCAATGATTCCTTCAATTTCAGGGAGAATGAGGTTCAGGCAGGTTCATCTGACACTACGTTGGGTGATGAAGGCCCAACTGGGAAGCTAACTGTTGAAGAAGACCCTGCGAAGCTTGGCAGCCCTGACAAGTCTTCAAAAGAGACTGTTGAAATAAAGCATGACGAAGAGGAAATGGTAGGACGGAACAGAGATGAAATTATTCTGTCCTAA 2274 0.4345 MDITEISILHHVGIVLLGLWLLSAYNWCQPVAYFVALIYLYLVHERYVTRLRKKLQFEEKKQANQRRVLSDSETLRWLNHAVENIWPICMEQIASQKILLPIIPWFLEKYKPWTAKKAIVQHLYLGRNPPLFTEIRVLRQSNDDHLVLELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHITGMHVEGKVLVGVKFRQTWPFLSRLRVCFVEPPYFQMTVKPIFTHGLDVTEVPGIAGWLDKLLSIAFEQTLVEPNMLVVDVEKFASPQPESWFTVNEKDPVAYAHVEVVEASDMKPSDLNGLADPYVKGHVGGYRFRTKTQRKTLTPKWHEEFRVPIISWACSNVLAIEVCDKDHFYDDNLGDCSVNLSDLRDGQRHDMWLPLQNIKTGRLHLAITISEDKAKGVDNTFNQETEDAEQKRNSFTNETSNKSSFSSVSSEKSQKVEDNYEPIDVEGQKETGIWVHHPGSEVSQTWEPRKGKSRRPDTEILREPNDLYGSFNSTVSGLLNNDCSSPDDNPEGKHRMKIVRRGLHKIGSVFRRGSKKEPPTPTSTGSTREAILSPRVNIKAVNAKEIGVKFIMEDNISGFPSGKVHKEGTSTESSGPESPNKGHVKDMAKNIMKHAEKSARGLKHVLSCKSRKFEGDSPGVRETEILKESDSSDVDSLPVQSPGDERIPVASKFIASFSNDSFNFRENEVQAGSSDTTLGDEGPTGKLTVEEDPAKLGSPDKSSKETVEIKHDEEEMVGRNRDEIILS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0250 757 ProSiteProfiles C2 domain profile. 269 383 IPR000008 -
Dere08g0250 757 MobiDBLite consensus disorder prediction 642 674 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 695 757 - -
Dere08g0250 757 SMART C2_3c 285 382 IPR000008 -
Dere08g0250 757 MobiDBLite consensus disorder prediction 471 497 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 477 492 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 540 561 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 715 757 - -
Dere08g0250 757 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 399 IPR035892 -
Dere08g0250 757 CDD C2 287 385 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 547 561 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 424 443 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 589 614 - -
Dere08g0250 757 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 719 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 594 608 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 695 711 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 642 661 - -
Dere08g0250 757 Gene3D C2 domain 272 401 IPR035892 -
Dere08g0250 757 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Dere08g0250 757 Pfam C2 domain 287 385 IPR000008 -
Dere08g0250 757 CDD SMP_SF 95 262 - -
Dere08g0250 757 MobiDBLite consensus disorder prediction 414 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0250 Dere-ChrDere08 4543399 4553785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0250 281 397 Lipid Metabolism Gene Families AT3G61300 31.148 4.63e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0250 08 4543399 4553785 Dere08g0250 08 4543399 4553785 ECH