Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0234 ATGGCGGAAGGAGAGGTGGTGCTGTTGGACGAGTGGCTTAGTATGTACGGGATGAGGGCGAGGATAGCATTAGCAGAGAAGGGAATCAAATACGAGTTCAAGGAAGAGGATCTCAGCAACAAGAGCCCTCTGCTTCTGCAAATGAATCCAATTCACAAGAAGATCCCTGTTCTTATTCACGAAGGCAAACCCATCTGCGAATCCCTCATAATTGTGGAGTATATCGATGAAGTTTGGAAGCACGAAGCTCCTTTGCTTCCCTCTGATCCTTACCACAGAGCTCAAGCCAGATTCTGGGCTGATTTTGTGAATAAGAAGGTAGGAGATGTAGGAGGAAGAATATGGGCAGGAAAGAGAGATGGACTAGAGGTGGCAAAGAAGGAGCTAATAGAAGGCTTAAAGCAATTGGAGGAGACTCTAGGTGACAACACTTATTTTGGGGGTGAAACATTTGGATTTGTTGACATTGCTCTCATCCCTTTCTATAGCTGGTTTTACACTTTTGAGGCATTATGCAACTTCAAAGTGGAAGCTGAGTGCCCTAAGCTTATTGCCTGGGCTGAGAGATGCAAGCAGAGAGAAAGTGTTTCTAAATCTCTTGCTGGTGAGAAGGAGGTCTACGATTTTGTTGTTGAATTCAGAAAGAGCTTTCACTTGGACTAA 663 0.4465 MAEGEVVLLDEWLSMYGMRARIALAEKGIKYEFKEEDLSNKSPLLLQMNPIHKKIPVLIHEGKPICESLIIVEYIDEVWKHEAPLLPSDPYHRAQARFWADFVNKKVGDVGGRIWAGKRDGLEVAKKELIEGLKQLEETLGDNTYFGGETFGFVDIALIPFYSWFYTFEALCNFKVEAECPKLIAWAERCKQRESVSKSLAGEKEVYDFVVEFRKSFHLD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0234 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Dere08g0234 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Dere08g0234 220 Gene3D - 89 220 - -
Dere08g0234 220 FunFam Tau class glutathione S-transferase 1 88 - -
Dere08g0234 220 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Dere08g0234 220 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Dere08g0234 220 FunFam Glutathione S-transferase U20 89 220 - -
Dere08g0234 220 Gene3D Glutaredoxin 1 88 - -
Dere08g0234 220 Coils Coil 119 139 - -
Dere08g0234 220 Pfam Glutathione S-transferase, N-terminal domain 10 77 IPR004045 -
Dere08g0234 220 CDD GST_N_Tau 6 79 - -
Dere08g0234 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Dere08g0234 220 SUPERFAMILY Thioredoxin-like 7 106 IPR036249 -
Dere08g0234 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Dere08g0234 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 201 IPR045073 -
Dere08g0234 220 Pfam Glutathione S-transferase, C-terminal domain 118 194 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0234 Dere-ChrDere08 4145699 4147240 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0234 4 217 Glutathione S-transferase Gene Family AT1G78380 63.084 3.32e-100 288