Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0230 ATGGTATTTGATTACTACGCATCTGGCGCCGAGGACCAGTGGACTCTGCAGGAGAACAGAAATGCCTTTTCCAGAATCCTGTTTCGGCCACGTATTCTTATTGACGTCAGCAGGATAGACATGACCACCACTGTCCTGGGCTTCAAAATATCCATGCCAATCATGATTGCCCCAACTGCCATGCAGAAAATGGCTCATCCTGAGGGAGAATATGCAACTGCAAGAGCTGCATCAGCTGCTGGAACAATCATGACTTTGTCCTCATGGGCTACTTCGAGTGTTGAAGAGGTGGCCTCAACAGGACCTGGCATTCGCTTTTTCCAGCTATATGTGTACAAGGACAGGAATGTTGTTGCTCAGCTTGTAAGAAGAGCTGAAAGGGCTGGATTCAAAGCCATCGCCCTTACTGTTGATACCCCAAGGCTTGGTCGCAGAGAAGCTGACATCAAGAACAGATTCACCTTGCCACCATTCTTGGCATTGAAAAACTTCGAAGGTTTGGACCTTGGCAAGATGGACGAAGCTGACGACTCTGGACTTGCATCATATGTGGCTGGCCAAATTGATCGTACTCTGAGCTGGAAGGATGTGAAGTGGCTTCAAACAATCACTTCGCTGCCAATTCTGGTGAAGGGTGTTCTGACTGCTGAGGATGCAAGGATAGCGGTACAGGCAGGAGCAGCTGGAATAATAGTGTCCAATCATGGAGCTCGACAACTCGATTATGTACCTGCCACTATAACGGCCCTAGAAGAGGTTGTCAAAGCTGCTCAAGGCCGAGTTCCTGTGTTCTTGGATGGTGGTGTTCGTCGTGGAACTGATGTCTTCAAGGCACTGGCTCTTGGAGCCTCAGGCATATTCATTGGACGCCCTGTGGTATTCTCATTGGCAGCCGAGGGAGAGGCTGGTGTGAGGAAAGTACTGCAGATGCTACGTGAAGAGTTTGAGCTAACCATGGCCTTGAGCGGATGCCGCTCACTGAAGGAGATCACGCGTGACCATATTGTGACAGACTGGGACCACCCTCGTCCTCAACCTCTTGCACTCCCCAGATTATGA 1059 0.4995 MVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSRIDMTTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLALKNFEGLDLGKMDEADDSGLASYVAGQIDRTLSWKDVKWLQTITSLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCRSLKEITRDHIVTDWDHPRPQPLALPRL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0230 352 Pfam FMN-dependent dehydrogenase 2 336 IPR000262 GO:0016491
Dere08g0230 352 FunFam peroxisomal (S)-2-hydroxy-acid oxidase GLO1 1 347 - -
Dere08g0230 352 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 340 IPR037396 -
Dere08g0230 352 PIRSF Al-hdrx_acd_dh 1 339 IPR012133 GO:0010181|GO:0016491
Dere08g0230 352 SMART IMPDH_2 21 343 - -
Dere08g0230 352 ProSitePatterns FMN-dependent alpha-hydroxy acid dehydrogenases active site. 233 239 IPR008259 GO:0016491
Dere08g0230 352 PANTHER S -2-HYDROXY-ACID OXIDASE-RELATED 1 341 - -
Dere08g0230 352 SUPERFAMILY FMN-linked oxidoreductases 1 337 - -
Dere08g0230 352 CDD alpha_hydroxyacid_oxid_FMN 1 332 IPR012133 GO:0010181|GO:0016491
Dere08g0230 352 Gene3D Aldolase class I 1 349 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0230 Dere-ChrDere08 4089917 4093087 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0230 08 4089917 4093087 Dere08g0230 08 4089917 4093087 ECH