Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0226 ATGGCTTCCCTCCAAAACTTCAACTTTGAAACCCAAATCCCAGAAGACCTCGTTCTAGCTCAGATCATGCAACTTCATGCAAGCATATCTAAGCTAGAATCTCTGAGGCCTTCCAAGCAAGTCAATAGCCTCTTCAATAACCTAGTCAAACTCTGCACCCTCCCTTCCTCCATTGATGTTCAAGCCTTACCCCAAGAGTTGAAAAATATGAGGGACAGTCTCATTAACCTCTCTGGCGAAGCTGAAGGCCTTTTGGAGCTAGAATTCTCAACTTTTCTTGCCAAGATTCCCAAACCCCTGAACAATCTCAATCTCTTCCCATACTATGGGAACTATGTTAAACTAGCAAACATGGAGAACACAGTCCTCAAAGAAAATGGGGTGGTCCATCCCAAGAAGGTAGCCTTTGTAGGGTCTGGTCCAATGCCACTCACTTCCATCATAATGGCTACACATCACTTAACATCCACACACTTTGATAACTTTGATTTCGATGAGAAAGCCAACGAGGCAGCTCGAAGGATTGTTGCAACAGATTCAGAGCTTGAGAAGAGGATGAAGTTTGAGACACAAGATATCATGGATGTCAAAGACAAGTTGGGGCAATATGATTGTATCTTTCTAGCAGCTCTTGTGGGTATGAACAGAGAAGCAAAAGTGAAGATTTTGGGACATGTAAGAAAGCATATGAAGGAAGGAGGATTTTTGCTTGTGAGAAGTGCAAAAGGGGCAAGAGGTTTCTTGTACCCTATTGTTGAGGAGCACGACTTGGTGAATTTTGAGGTGCTTACCATCTTTCATCCCACAAACGATGTAATCAACTCAGTCGTTCTTCTTCGCAAGCCTATGATTTAG 855 0.4304 MASLQNFNFETQIPEDLVLAQIMQLHASISKLESLRPSKQVNSLFNNLVKLCTLPSSIDVQALPQELKNMRDSLINLSGEAEGLLELEFSTFLAKIPKPLNNLNLFPYYGNYVKLANMENTVLKENGVVHPKKVAFVGSGPMPLTSIIMATHHLTSTHFDNFDFDEKANEAARRIVATDSELEKRMKFETQDIMDVKDKLGQYDCIFLAALVGMNREAKVKILGHVRKHMKEGGFLLVRSAKGARGFLYPIVEEHDLVNFEVLTIFHPTNDVINSVVLLRKPMI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0226 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 282 IPR004298 GO:0030410|GO:0030418
Dere08g0226 284 CDD AdoMet_MTases 162 238 - -
Dere08g0226 284 Gene3D Vaccinia Virus protein VP39 18 282 IPR029063 -
Dere08g0226 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Dere08g0226 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 240 IPR029063 -
Dere08g0226 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0226 Dere-ChrDere08 4060264 4061118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0226 16 281 Nicotianamine Synthase Gene Family AT5G56080 53.704 2.89e-95 282