Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0214 ATGGGAATAGGGTGGAATTGCAAATTCCAGAATGGGGTTTGCTCGATGCTAATATATTTTTTGGGCATCGTCCTAGTATGTTCGATTAATGAAGAGGGTTCAAATCTTTTGAAGTTTAAAGGTTCCCTTGTTGACCCCCAAAACAATCTTCACAATTGGAATTCTTCTGATTTCACTCCTTGCAATTGGAATGGTGTGCATTGCACCGATTCAATGGTAACTTCTGTAAACCTCTATCATTTCAATCTCTCTGGTACTTTATCTCCTAGCATCTGTAATCTTCCTCGGCTAGTTGAGTTGAATCTGTCAAAAAATTTCATTTCTGGTCCTATTCCCGTAGATTTTGTTGACTGTCGTAGTATGGAGATACTAGACCTTTGTACAAACAGGTTCCACGGAGAACTTCTGACTCCTTTCTGCAAAATCACCACACTTAGGAAGCTTTACCTCTGTGAAAATTCTATGTATGGTGAAGTGCCAGAAGAGATTGGGAATTTAACTTCACTTGAAGAGCTAGTCATTTATAGCAATAACTTAACTGGAAGAATTCACACATCAATCAATAAGTTGAAGCAGCTTAAAATCATCAGGGCAGGTCTTAATAGCCTCTCGGGTCCAATACCAGCAGAAATAAGCGAGTGTGAGAGCTTGGAGATATTAGGATTGGCACAGAATCTGTTAGAAGGGTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACTGATTTAATTCTATGGCAAAATTATTTATCTGGTGAGATTCCTGTTGAGATTGGAAATATCAGTAGTCTGCGATTGCTTGCTTTGCATCATAATTCATTTGGTGGAGCTCTCCCCAAAGAGCTTGGAAAGTTATCACAGCTACAAAGGTTGTACATATACACCAACCACTTAAATGGCACAATTCCGATGGAGCTGGGGAACTGTACAAGTGCTGTTGAGATAGATCTATCTGAAAACCGTTTGAGTGGGATTATTCCCAGAGAGTTGGGTCAGGTCTCTAACCTTGGCTTGCTTCATCTATTTGAAAACCACCTGCAAGGAGAGATCCCTCAAGAGCTTGGGCAGTTAAAGCTGTTAAAGAAATTAGACCTGTCAATAAATAACTTAACAGGTACAATTCCGCTAGTGTTTCAAAATCTTACTTACATGGAGGATTTGCAGCTATTTGACAATCAACTTCAGGGTAAGATTCCTCCTCATCTTGGTTCTAATAGCAACCTCACTATTCTTGATATCTCTGCAAATAATCTTGTTGGTATGATACCTGTTCATCTTTGCCAATCTCAGAAACTGCAATTTTTGAGCCTTGGGTCAAATAGGTTGTTTGGTAATATTCCTGATGATCTGAAAACTTGCAAGTCTCTTGTGCAGCTAATGCTGGGGGATAACCAGCTGACTGGTAGCTTCCCTATTGAATTATCTGAACTTCATAACCTTTCTGCTCTTGAACTTAATCAGAATCGATTCTCTGGACTAATAAGCCATGGGATAGGTCAACTCAGGAACTTAGAGAGGCTTCTCTTATCGGATAATTATTTTGTGGGGTATCTCCCTTCTGAGATTGGAAATTTAACACAACTTGGCTCATTCAACATTTCCTCTAATCGTCTCAGCGGAAGTATACCTCATGAGTTGGGAAATTGCATAAAACTCCAGCGGCTTGATTTAAGTAGAAATCAGTTTGCTGGTGACCTTCCAGATGATATTGGCATGTTGGTGAATCTGGAGCTGTTGAAACTTTCGGATAATAGATTCTCTGGAGCAATTCCAAGCACTTTAGGGAACCTTACACGTCTCACAGATCTGGAACTAGGTGGTAACATATTTTCTGGGAGCATTCCTTTTCAATTGGGTAGACTAGCTGCTCTTCAGATTGCTCTTAACTTGAGCTATAACAAACTTTCTGGTACAATTCCTGACAACCTGGGGAACTTGCAAATGTTGGAAAGTCTTTATTTAAACGACAATCAGCTTGTTGGTGAAATTCCTCGATCAATTGGTGACCTCCCCAGCCTCTTAGTATGCAATGTTTCCAACAATAACCTGGTGGGGGCCATTCCAAACACCCCTGCATTTAGAAGGATGGATTTTACAAATTTTGCAGGAAACAATGGGTTGTGTCGAGTAGGTTCATATTATTGTCATCGATCTCATGCTCCAAAATCAAGCTGGATCAGAGATGGTTCATCAATGGAAAAGATAGTGAGCATTGTTTCTGGAATAGTTGGATTTGTTTCTCTTATTTTCATAGCCTGTATATGTTGGGCCATCAAACGTCGTAGGCCGCCTTTTGTCTCACTCAAACAGCAAGACAAACCTCATGTCCTTGATAACTATTACTTTCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGCAATTTTTCAGAAGCAGTTGTTATAGGAAGAGGAGCTTGCGGCACTGTCTACAAGGCTATCATGACTGATGGTGAGGTGATTGCTGTCAAAAAGCTGAATTCTCATGAAGGAGCCAATGTTGATAGAAGCTTCCTTGCAGAAATTTCGACTCTTGGAAAGATCAGGCACAGAAATATTGTGAAGCTATTTGGATTTTGTTGTCATGAGGATTCTAATATTCTTTTATATGAGTACATGGAAAATGGCAGCCTTGGCGAACAACTTCATTCAGATCCAAACATGTGTTTACTGGGCTGGAGTAGTCGCTATAAAATTGCTCTTGGAGCAGCAGAAGGCTTGTCCTATCTTCATTATGACTGTAAACCTCAAATCATCCACCGTGATATAAAGTCAAACAATATATTGCTTGACCAAGTATTTCAGGCTCATGTTGGAGATTTTGGCTTGGCTAAGTTGATTGACTTTTCTTATTCTAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTAGAACTAGTTACTGGCAGGTCACCTGTTCAACCGTTGGAACAGGGTGGTGATCTAGTTACTTGGGTGAGAAGAGCAATTCAAGCATCAGTGCCGACATCTGAATTATTGGACAAGCGATTGAATCTGAGTGCACAAAGAACAATTGAAGAGATGGCTCTTGTTCTCAAAATTGCTTTGTTTTGCACCAGTACATCTCCACTTAATAGGCCAACTATGAAAGAGGTTATCGCAATGTTGATTGATGCTAGGGAGTATGTCAGCAATTCTCCAGCGACTCCTACATCTGAATCCCCACTAGACGAAGATGCTTCTTCCAAAGGTGGTATTGCGTTGTAA 3315 0.4048 MGIGWNCKFQNGVCSMLIYFLGIVLVCSINEEGSNLLKFKGSLVDPQNNLHNWNSSDFTPCNWNGVHCTDSMVTSVNLYHFNLSGTLSPSICNLPRLVELNLSKNFISGPIPVDFVDCRSMEILDLCTNRFHGELLTPFCKITTLRKLYLCENSMYGEVPEEIGNLTSLEELVIYSNNLTGRIHTSINKLKQLKIIRAGLNSLSGPIPAEISECESLEILGLAQNLLEGSIPRELQKLQNLTDLILWQNYLSGEIPVEIGNISSLRLLALHHNSFGGALPKELGKLSQLQRLYIYTNHLNGTIPMELGNCTSAVEIDLSENRLSGIIPRELGQVSNLGLLHLFENHLQGEIPQELGQLKLLKKLDLSINNLTGTIPLVFQNLTYMEDLQLFDNQLQGKIPPHLGSNSNLTILDISANNLVGMIPVHLCQSQKLQFLSLGSNRLFGNIPDDLKTCKSLVQLMLGDNQLTGSFPIELSELHNLSALELNQNRFSGLISHGIGQLRNLERLLLSDNYFVGYLPSEIGNLTQLGSFNISSNRLSGSIPHELGNCIKLQRLDLSRNQFAGDLPDDIGMLVNLELLKLSDNRFSGAIPSTLGNLTRLTDLELGGNIFSGSIPFQLGRLAALQIALNLSYNKLSGTIPDNLGNLQMLESLYLNDNQLVGEIPRSIGDLPSLLVCNVSNNNLVGAIPNTPAFRRMDFTNFAGNNGLCRVGSYYCHRSHAPKSSWIRDGSSMEKIVSIVSGIVGFVSLIFIACICWAIKRRRPPFVSLKQQDKPHVLDNYYFPKEGFTYQDLLEATGNFSEAVVIGRGACGTVYKAIMTDGEVIAVKKLNSHEGANVDRSFLAEISTLGKIRHRNIVKLFGFCCHEDSNILLYEYMENGSLGEQLHSDPNMCLLGWSSRYKIALGAAEGLSYLHYDCKPQIIHRDIKSNNILLDQVFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRAIQASVPTSELLDKRLNLSAQRTIEEMALVLKIALFCTSTSPLNRPTMKEVIAMLIDAREYVSNSPATPTSESPLDEDASSKGGIAL 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0214 1104 Gene3D Ribonuclease Inhibitor 380 723 IPR032675 -
Dere08g0214 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 876 - -
Dere08g0214 1104 SMART LRR_typ_2 94 118 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 358 381 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 166 190 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 286 310 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 647 671 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 478 502 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 526 550 IPR003591 -
Dere08g0214 1104 SMART LRR_typ_2 574 598 IPR003591 -
Dere08g0214 1104 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 183 - -
Dere08g0214 1104 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Dere08g0214 1104 SMART serkin_6 800 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0214 1104 PANTHER UNNAMED PRODUCT 381 1003 - -
Dere08g0214 1104 ProSiteProfiles Protein kinase domain profile. 800 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0214 1104 MobiDBLite consensus disorder prediction 1081 1104 - -
Dere08g0214 1104 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Dere08g0214 1104 Gene3D Ribonuclease Inhibitor 215 379 IPR032675 -
Dere08g0214 1104 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Dere08g0214 1104 SUPERFAMILY L domain-like 32 312 - -
Dere08g0214 1104 SUPERFAMILY RNI-like 371 689 - -
Dere08g0214 1104 Gene3D Phosphorylase Kinase; domain 1 767 876 - -
Dere08g0214 1104 Gene3D Transferase(Phosphotransferase) domain 1 877 1089 - -
Dere08g0214 1104 SUPERFAMILY Protein kinase-like (PK-like) 779 1072 IPR011009 -
Dere08g0214 1104 FunFam Predicted protein 184 279 - -
Dere08g0214 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Dere08g0214 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 280 382 - -
Dere08g0214 1104 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 877 1089 - -
Dere08g0214 1104 Pfam Protein kinase domain 802 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0214 Dere-ChrDere08 3820048 3824666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0214 54 1076 Receptor kinase-like Gene Family AT1G73080 38.462 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere08g0214 Pkinase 3.6e-46 CL0016