Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0212 ATGGATCAAGAAGATACCTTTTTCCCTCGAGATACAGATCTCGACCTCAGCTTCACCAGCACCACCTCCGCCGCCACCGACCGCACCTTTGCTTCCTCCAGCGCTCGCACCAGCTTGGCTCGCACCAGCTTAACTCTCAGCTTCAACGACCGTCTCTCCACCGCCTCCGCCACAGCCGGAACTTCCTCTTCTGCACTCTTACTACGCCCGCATCGGTCCTCCGATCCTCATTGGTCTGCCATCAAAGCTGCCACCACCCTCTCATCTGACGGCGCTCTCCATCTCCGCCACCTCAAGCTCCTCCGCCACCTCGGCACGGGGAATCTAGGACGAGTATTCCTCTGCCGCCTTCGCGACTACGATCACGCAAATTTTGCCCTCAAGGTTGTTGATAAGGACTTGCTAAGTAGCAAGAAGCTCTCCCACGTACAGATGGAAGGGGAGATCCTGTCCATGCTGGACCATCCTTTTCTCCCTACGCTCTACGCTCGATTGGAGGTCTCGCATTACACGTGTCTTTTGATCGACTACTGCCCTGGCGGCGACCTCCACTCGCTCCTCCACAAACAGCCCGGAAACCGGCTTCCGGTTCAGGCGGTTCGGTTTTTCGCGGCGGAGGTGCTGGTAGCGTTGGAATATTTGCATGCGCTTGGCGTGGTGTATAGGGATCTGAAACCGGAGAACGTTCTGTTACGCGAGGATGGCCACGTCATGCTGTCCGACTTCGATTTGTGCTTCAAGGCCGACGTGGTCCCCACATTTGAGTGCCGGGTCCACGACAGGACGGTCGAGCCCACTAAGAAGAAGAAGCGCGTGTGCAACTGTTTCGGTGGCGTTAGAGCGAGGTCGCCGGAGCAAGTGATGGCGGCAGAGTTTATGGCGGAGCCGACGGCGGCGTTCTCGAGGTCGTGCGTTGGGACCCACGAGTACTTGGCGCCGGAGCTGGTCTCCGGCAACGGGCACGGTAACGGCGTGGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGTTGTTGTACGGGACGACGCCGTTTAAGGGCTGGAGCAAAGAGAGCACCCTGCGCAATATAGCATCGAGTAGAGATGTCAATTTCCACGTGGCGGAAGTAGAGGAGGGAATGGCGGAAGCGAGGGATTTGATTGAGAAGCTGTTGGTGAAGGACCCGATGAGGAGGCTAGGATGCGCCAGGGGTTCGACGGATATTAAACGACACCCGTTTTTTGGTGGGATCAAGTGGCCGTTGATCCGAACCTATAGGCCACCGGAGGTTCGGGGGCTTATGAGGAAGGGGAGGTCGCACGTGAGCAGTCACGTGACCCATAGGAGTAGGCGATGGTGGGGGAAGGGGCTTGATTATGTTCTTAAGAGAAATAAGGGATCTAAATATAACTCAATTTCCAAGCACAGTAATGGTAATTATTATCATTACGTTAATAGTAATAAGGTTAGGAAAAGTGCTTGA 1461 0.5558 MDQEDTFFPRDTDLDLSFTSTTSAATDRTFASSSARTSLARTSLTLSFNDRLSTASATAGTSSSALLLRPHRSSDPHWSAIKAATTLSSDGALHLRHLKLLRHLGTGNLGRVFLCRLRDYDHANFALKVVDKDLLSSKKLSHVQMEGEILSMLDHPFLPTLYARLEVSHYTCLLIDYCPGGDLHSLLHKQPGNRLPVQAVRFFAAEVLVALEYLHALGVVYRDLKPENVLLREDGHVMLSDFDLCFKADVVPTFECRVHDRTVEPTKKKKRVCNCFGGVRARSPEQVMAAEFMAEPTAAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFIYELLYGTTPFKGWSKESTLRNIASSRDVNFHVAEVEEGMAEARDLIEKLLVKDPMRRLGCARGSTDIKRHPFFGGIKWPLIRTYRPPEVRGLMRKGRSHVSSHVTHRSRRWWGKGLDYVLKRNKGSKYNSISKHSNGNYYHYVNSNKVRKSA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0212 486 SUPERFAMILY Protein kinase-like (PK-like) 77 433 IPR011009 -
Dere08g0212 486 FunFam Serine/threonine-protein kinase OXI1 299 425 - -
Dere08g0212 486 Gene3D Transferase(Phosphotransferase) domain 1 182 249 - -
Dere08g0212 486 CDD STKc_phototropin_like 105 423 - -
Dere08g0212 486 SMART serkin_6 98 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0212 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Dere08g0212 486 FunFam Serine/threonine-protein kinase OXI1 182 250 - -
Dere08g0212 486 PANTHER FLIPPASE KINASE 1-RELATED 37 425 - -
Dere08g0212 486 Pfam Protein kinase domain 100 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0212 486 Pfam Protein kinase domain 301 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0212 486 ProSiteProfiles Protein kinase domain profile. 98 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0212 486 Gene3D Transferase(Phosphotransferase) domain 1 301 421 - -
Dere08g0212 486 Coils Coil 366 386 - -
Dere08g0212 486 Gene3D Phosphorylase Kinase; domain 1 97 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0212 Dere-ChrDere08 3813972 3815432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0212 1 477 AGC Kinase Gene Family AT3G14370 67.284 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere08g0212 Pkinase 7.6e-33 CL0016