Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0210 ATGCTTATATTAGTGGGCAACATTCAAGGAACAATGGCCTCTCTTGCTTCCCCAGTCAATTTGGGAGGTCTAGTTGGAGTGAATTCCTCTGGAAGGACCCGTTCTTTTGGAAGGAGAGTTTCTCTTTCTAGAGGAAATTTTAAGAGTAGAAGGAGTTGGCATTGTTTCTCCTTGTCTGTTTGTAGATATTCAGTGGTTACGACTGATTTCATATCTGACCAAGGCAATGCAGTGTCCCTTGACTCTAACAGTGATAGAGGAAGTAAAGGTACTGCAGATGATACTGCTGGTTTTGTTCTTAAGCCTCCTCCAAAGCCAGTATTGAAGTCCTCGGAAACCAAGGGTGACCCCATTATAGGCGGAAATTCCAAAGGGTGGGATCCTTCCAAAGCTACTATGCAATTTGGTAACGAAAAGTTAGATGATGTTGAAGAGAGGAATAAGGTGATTGAGTCACTTGGAGAAGTGTTGCAGAAGGCTGAAAAGCTGGAAAGTTCAAAGTTGGATGGTAAAAGAAATAACGGACCAGTGAATAAACCATCAATATCTAGTACAACCAGTAATCCTAGAACTGATAAATTGGTAAACTCAACAACAAACCAGATGTCTAAAACCGTGAAGAGCGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCAGAAGGTTGTGAAGGAACCAACCAAGCCTAATACTAAGAATGAACGAGAGAAATCTCAAACAGGGGGAGGGGGAAAGGTGACATTGCAGTCACGTGCTCCTCCAAGAACTCCTCAGCCTTCATCAAGACCTCAGCCAATGTTACAAGCTAAACCTTCTGTAGCACCACCACCCATTAAAAAACCTGTTTTGAAGGACAACAGATCAGCTGGCACACCTGTTAAAGATAAAGAAAGGAAGCCAATTTTGATTGATAAGTTTGCTACCAAGAAACCAGTAGTTGATCCTCTAATTGCACAAGCAGTTCTAGCCCCTCCAAAACCAGGAAAAGGCCCTCCGTCAGGAAAGTTTAAAGATGATTACCGGAGGAAAAGTGCTCCAGCTGGAGGAGGACCAAGGAGACGAGTATTAGATGATGATGTTGATGAGATACCTGATGAGGACACATCTGAACTCAGTGTCTCTATTCCCGGTGCTGCAACTGCAAGAAAAGGCAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGGCTCCAGGCTGCCAAGGAGGCAGCTCCTGTCAAAGTGGAAATTCTAGAGGTCAGTGATAAAGGTATGTTGATAGAGGAGTTAGCCTATAACTTGGCGATCAGTGAAGGTGAAATCCTAGGTTATCTATACTCCAAGGGGGTTAAACCAGATGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGTGTAGAAGTAATAGATGCTGATCCTGTCAAAGTTGAAGGATTGGTAAAGAAAAGGGAAATTCTTGATGAAGATGACCTTGACAAACTCAAAGACAGGCCTCCTGTCATTACTATAATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAGGAGCAAGGTTGCTGCTTCAGAAGCAGGTGGGATTACGCAAGGAATTGGGGCATATAAAGTGCAAGTACCTGTTGATGGCAAACTGCTGCCTTGTGTTTTCCTTGATACTCCAGGGCATGAGGCATTTGGGGCAATGAGAGCTAGAGGAGCAAGTGTAACAGATATTGCTATAATTGTCGTGGCTGCTGATGATGGAATTCGTCCACAAACAAATGAAGCCATTGCTCATGCCAAAGCAGCAGGAGTACCCATAATTATTGCTATAAACAAGATAGATAAAGATGGATCAAATCCAGAACGTGTAATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCGCTCAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCGAAAGGACCATTTGCTACTTTTTTAGTGGAGAATGGCACCCTTGAAAGGGGAGATGTAGTAGTTTGCGGAGAAGCTTTTGGAAAGGTGCGGGCCCTATTTGATGATGCTGGAAAACGTGTTGATTTAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTAACTCCCTTGATGCTGCACGTGAAAAAGCAGAGTCCCGTGCTGAATCATTGCGAAATGAGCGAATTTCAGCTAAGGCAGGGGATGGCAAGGTTACCCTTTCTTCTTTAGCTTCTGCAGTTTCAGCAGGAAAGCTTTCTGGATTAGACTTGCACCAACTAAATATCATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCCTGCAGGTGCTACCACAAGATAACGTCACATTGAAGTTTTTGTTGGAAGCAACCGGTGATATAAGCACCAGTGATGTTGACCTTGCGGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGCACCAGGTTCTGTAAATAGCTATGCAGAGAATAAACTCGTCGAGATTAGATTATATAGAGTGATTTATGAACTAATTGATGATGTGCGGAATGCAATGGAAGGACTTTTGGAGCCTGTTGAGGAACAAGTAACAATTGGCTCTGCAGAAGTGAGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTAACAGAGGGAAAAATACTTAAAGGCTGTGGCATTCAGATCATTCGTAAAGGAAAAGTAGTTCATGTTGGTGTGGTTGATTCTCTGAGACGAGTGAAGGAGATTGTGAAAGAGGTAAATGCTGGTCTAGAGTGTGGAATTGGTCTAGAAGATTACGATGATTGGGAAGAGGGAGATATTATTGAGGCATTCAACACTGTTCAGAAGAAGCGGACCCTTGAAGAGGCATCGGCATCTATGGCAGCTGCGGTGGAAGGAGTAGCAGAGTTGTAG 3072 0.4352 MLILVGNIQGTMASLASPVNLGGLVGVNSSGRTRSFGRRVSLSRGNFKSRRSWHCFSLSVCRYSVVTTDFISDQGNAVSLDSNSDRGSKGTADDTAGFVLKPPPKPVLKSSETKGDPIIGGNSKGWDPSKATMQFGNEKLDDVEERNKVIESLGEVLQKAEKLESSKLDGKRNNGPVNKPSISSTTSNPRTDKLVNSTTNQMSKTVKSVWRKGDTVANVQKVVKEPTKPNTKNEREKSQTGGGGKVTLQSRAPPRTPQPSSRPQPMLQAKPSVAPPPIKKPVLKDNRSAGTPVKDKERKPILIDKFATKKPVVDPLIAQAVLAPPKPGKGPPSGKFKDDYRRKSAPAGGGPRRRVLDDDVDEIPDEDTSELSVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGYLYSKGVKPDGVQTLDKDMVKMICKEQGVEVIDADPVKVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRRSKVAASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGSNPERVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFLVENGTLERGDVVVCGEAFGKVRALFDDAGKRVDLATPSIPVQVIGLNNVPIAGDEFEVVNSLDAAREKAESRAESLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDISTSDVDLAVASKAIILGFNVRAPGSVNSYAENKLVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVTIGSAEVRATFSSGSGRVAGCMVTEGKILKGCGIQIIRKGKVVHVGVVDSLRRVKEIVKEVNAGLECGIGLEDYDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVEGVAEL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0210 1023 MobiDBLite consensus disorder prediction 332 359 - -
Dere08g0210 1023 MobiDBLite consensus disorder prediction 240 255 - -
Dere08g0210 1023 NCBIfam small GTP-binding protein domain 497 658 IPR005225 GO:0005525
Dere08g0210 1023 Gene3D Translation factors 671 787 - -
Dere08g0210 1023 Gene3D - 492 670 IPR027417 -
Dere08g0210 1023 FunFam Translation initiation factor IF-2 492 670 - -
Dere08g0210 1023 Gene3D - 803 908 IPR036925 -
Dere08g0210 1023 Pfam Translation-initiation factor 2 803 896 IPR023115 -
Dere08g0210 1023 CDD mtIF2_IVc 914 996 - -
Dere08g0210 1023 Hamap Translation initiation factor IF-2 [infB]. 7 1004 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dere08g0210 1023 Coils Coil 754 781 - -
Dere08g0210 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 671 IPR027417 -
Dere08g0210 1023 CDD IF2_mtIF2_II 675 769 IPR044145 -
Dere08g0210 1023 SUPERFAMILY Translation proteins 671 755 IPR009000 -
Dere08g0210 1023 MobiDBLite consensus disorder prediction 77 130 - -
Dere08g0210 1023 Pfam Elongation factor Tu GTP binding domain 500 660 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 CDD IF2_eIF5B 498 664 - -
Dere08g0210 1023 MobiDBLite consensus disorder prediction 176 208 - -
Dere08g0210 1023 MobiDBLite consensus disorder prediction 164 371 - -
Dere08g0210 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 495 668 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 MobiDBLite consensus disorder prediction 289 305 - -
Dere08g0210 1023 FunFam Translation initiation factor IF-2 671 789 - -
Dere08g0210 1023 SUPERFAMILY Translation proteins 910 1004 IPR009000 -
Dere08g0210 1023 PRINTS GTP-binding elongation factor signature 499 512 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 PRINTS GTP-binding elongation factor signature 603 612 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 PRINTS GTP-binding elongation factor signature 551 561 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 PRINTS GTP-binding elongation factor signature 567 578 IPR000795 GO:0003924|GO:0005525
Dere08g0210 1023 FunFam Translation initiation factor IF-2 803 908 - -
Dere08g0210 1023 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 205 1012 IPR015760 -
Dere08g0210 1023 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 802 914 IPR036925 -
Dere08g0210 1023 FunFam Translation initiation factor IF-2 908 1005 - -
Dere08g0210 1023 NCBIfam translation initiation factor IF-2 417 1006 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dere08g0210 1023 Gene3D Translation factors 909 1005 - -
Dere08g0210 1023 ProSitePatterns Initiation factor 2 signature. 957 979 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0210 Dere-ChrDere08 3783401 3792151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0210 474 894 Eukaryotic Initiation Factors Gene Family AT1G76810 29.303 1.03e-27 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0210 08 3783401 3792151 Dere08g0210 08 3783401 3792151 ECH