Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0203 ATGTGTGCTTCCACAATGGCTCAGAGCAATTTGCTTGCAAACTTCTACGAATCTCTGTTGCTTCCGTGTTTAGAATGCAGAATTTGGAATTCTTGGAGGAAACGGAACCCCAATCTGGAGGAATTTGGTTACGAGATGCTTGGCCCGGTTCGCGGGTTCAAGAAGGTTTATCATGGCATATTACGTGGCGGAAACCGCCGAATCGTGGCCATCAAAGAGATTGCCATTAGTGACGATAGTGAAGCAGTTCGGAGACAAATCTATTATCTTAAATATCGATTTAAACATGGAAACGTTGTCAGTCATGTGATGAAGGTTTCTTGTGTTTTGGAAAATGGTCATGGGGATAATGAAACCCTGCTGGTTACATATGAGTATGCTCAATCTCAATTGCTGGATACATTGATCAGGGGAAATCGTCTGTATCTTGTTTATGAGTATTTTACCCCTGATCTTTGCTATCTCATCAGCCAGCCAGTTAACCGTGAAGATCCACAGCGAAGAATACTCTCTGCTGTAGCATATTATCATTCTCATGGGATTCTCCACAGAGATCTGAAACCACAGAATTTCCTCTTAGATTTCTTTGCCGATTCACTCAAGCTAGCTGATTACGATTGGGCATGTGCATCTGGAAATCCTGACGCATATTATACTATGGAAACTTCCCAGTACAGTGCCCCTGAGCTCCTGCTTGGGTCCCGTTTTTATTCAAAGGCAGCTGATGTGTGGTCTGTGGGTTGCATATTTGGAGAGATGGTAACTGGGCAAGCTCTGTTCCATGGAAAACGCCAAAAGGATCAATTGGAGAAAATTTTTCGTTTGTTAGGTACCCCAACTGAAGAATCCTGGCCTGGGGTGAATGCACTATGTAACTCACTTTCTTCCTTCCCCAAATTTGAGCCAATGGACCTGGCAGTAAAGTTCCCTGGTTTGTTACCAGAAGGCCTTGATCTTCTATCATCTCGGTCACTGTCCAGTTCTGTCTTGGTCCTCTTTGATGCATATGCCAAGAAAACTATTATATCTAGCAAGTCTTCTTCTGTGCTTTTCACTGACGGCCAATTATTGTACGTGGCAGCAAATGCTCTGCCTGGATCCAAGCAGAAGAATTTCAGCTACTGA 1125 0.4364 MCASTMAQSNLLANFYESLLLPCLECRIWNSWRKRNPNLEEFGYEMLGPVRGFKKVYHGILRGGNRRIVAIKEIAISDDSEAVRRQIYYLKYRFKHGNVVSHVMKVSCVLENGHGDNETLLVTYEYAQSQLLDTLIRGNRLYLVYEYFTPDLCYLISQPVNREDPQRRILSAVAYYHSHGILHRDLKPQNFLLDFFADSLKLADYDWACASGNPDAYYTMETSQYSAPELLLGSRFYSKAADVWSVGCIFGEMVTGQALFHGKRQKDQLEKIFRLLGTPTEESWPGVNALCNSLSSFPKFEPMDLAVKFPGLLPEGLDLLSSRSLSSSVLVLFDAYAKKTIISSKSSSVLFTDGQLLYVAANALPGSKQKNFSY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0203 374 SUPERFAMILY Protein kinase-like (PK-like) 55 321 IPR011009 -
Dere08g0203 374 ProSiteProfiles Protein kinase domain profile. 36 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0203 374 SMART serkin_6 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0203 374 Gene3D Phosphorylase Kinase; domain 1 66 147 - -
Dere08g0203 374 Pfam Protein kinase domain 55 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0203 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Dere08g0203 374 Gene3D Transferase(Phosphotransferase) domain 1 148 322 - -
Dere08g0203 374 PANTHER CELL DIVISION PROTEIN KINASE 55 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0203 Dere-ChrDere08 3539649 3543323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0203 69 322 Core Cell Cycle Gene Families AT3G48750 41.199 4.20e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Dere08g0203 Pkinase 9.7e-35 CL0016