Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0195 ATGAGCAACATAAGCATGGTAGAGGCAAAGTTGCCACCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGTGATTACTTAATGAAGAAGGTGACACAGTGTGACTCCTCTCTCATGACTGATGTTGATCTAAACAAGTGCGAACCATGGGACATTCCTGAAACAGCATGCGTAGGAGGGAAGGAGTGGTATTTCTACACACAGCGAGACCGCAAGTATGCCACCGGCCTACGCACAAATCGTGCAACTGCTTCAGGCTATTGGAAGGCCACAGGGAAGGATAGGCCTATTCTTCGCAAGGGCACCCTCGTTGGCATGAGGAAGACTTTGGTGTTCTATCAAGGAAGGGCACCCAAAGGGAGAAAGACCGAATGGGTCATGCATGAGTTTCGCCTTGAAGGTCCCCATGGCCCTCCTAAACTTTCTTCAACCAAGGAGGATTGGGTTCTGTGCAGGGTGTTCCACAAGAACAGAGAAATTTCTGCGAAACAGAGCATGGGAAGCTGCTACGATGACACAGGCTCTTCACCTCTTCCTGCATTAATGGATTCCTACATCAGTTTCGACCAACAAGCTCAAACTCAAACCCATCTAGATGAATACGAGCAAGTGCCCTGCTTCTCCATTTTCCCACCAACCCAAACAAACCCTAATTTCAACCACACAAGTAGTACAATCATAATGGAGCCAAATTTATCACTACCTGCTAAGAATAATAATGTGACTACCACATATGGAGGAGGAACAACACCCTACAATCTGGAATCTTCTTGCTTGGACCCTAATTTGAATTTCCTGTGTGACAATAGGAAGGTATTGCAAGCTGTTCTGAGTCAACTCACCAAGATTGAAAGAAACCATAATAACCCAATTTCTACTTTCAATGGATCACCAAGCTTGGGGGAAGGAAGTTCAGAGAGTTACCTATCTGAAGTGGGTATGCCCAACTTGTGGAACAATTTCATATAG 975 0.4544 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTQCDSSLMTDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPHGPPKLSSTKEDWVLCRVFHKNREISAKQSMGSCYDDTGSSPLPALMDSYISFDQQAQTQTHLDEYEQVPCFSIFPPTQTNPNFNHTSSTIIMEPNLSLPAKNNNVTTTYGGGTTPYNLESSCLDPNLNFLCDNRKVLQAVLSQLTKIERNHNNPISTFNGSPSLGEGSSESYLSEVGMPNLWNNFI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0195 324 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Dere08g0195 324 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Dere08g0195 324 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Dere08g0195 324 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Dere08g0195 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 222 - -
Dere08g0195 324 FunFam NAC domain-containing protein 100-like 20 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0195 Dere-ChrDere08 3462384 3466392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0195 2 321 NAC Transcription Factor Family AT1G56010 58.133 2.02e-124 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere08g0195 NAM 7.5e-37 No_clan