Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0159 ATGGCTTCCATTCCTCAATTCTATTCAAACCACACATTCCCTAGTGATTGTGTTTTCCCCGACTTCTCCGCCATTACCCCAGAAATTGGAATAAGTTCCTCACTTATGCAAGACAATACAATGTGGGGTGGTCATCCATATAACTTACTTCCCATGCTTGACAATAATTTTGGTAGTAGTGATCATATTGCGTCCATGGATTGCGATACCATGTCTTCTACTTGGTTGCCGGCTTATTCAGATCACCCGGTGGGCGTGTCGGAGTTGACGGTGCCGGAAGGTTCAGACCTCAAAACGTGGTTCTATGGCAGTAACAATGAGGGGTTTCAGACTTTGAGCGGTGGAATATACCAACAACGTCCACACATGGGTGACTTTGGAGAAGAATGTTGTGGGATTGTGGAGGATGTGAAGCCACTTGCTTGTCCTAAAACTGCAACAGAAAACTGGGGAATTCATGGGAATCAAATGCTAGCAGTTGATCAAGAAAACATTAAGGTAGGAAGATATTCGGAAGAAGAAAGGAAGGAACGGATTCTACGATATGTGAGGAAAAGAAACCAAAGGAACTACAACAAAACAATTAAGTATGCTTGTCGGAAAACCCTAGCTGATCGGAGAGTCAGAGTTAGGGGAAGGTTTGCTAGGAACAATGAGCTATGTGAGGATGAAATAAGAATGAAAAAGAATATTGAGAATCTTCAACATGACGACTTGTATGGTGGTGATTCTATCCACTTCCAGTTAAAGAATGATGAAGAGGATTGGCTGCAAGAGGCAATGGAAAGTCTGGTGTTTCTTTCTCATTCTTCGCCGGATGATATATAA 828 0.4251 MASIPQFYSNHTFPSDCVFPDFSAITPEIGISSSLMQDNTMWGGHPYNLLPMLDNNFGSSDHIASMDCDTMSSTWLPAYSDHPVGVSELTVPEGSDLKTWFYGSNNEGFQTLSGGIYQQRPHMGDFGEECCGIVEDVKPLACPKTATENWGIHGNQMLAVDQENIKVGRYSEEERKERILRYVRKRNQRNYNKTIKYACRKTLADRRVRVRGRFARNNELCEDEIRMKKNIENLQHDDLYGGDSIHFQLKNDEEDWLQEAMESLVFLSHSSPDDI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0159 275 Pfam CCT motif 175 217 IPR010402 GO:0005515
Dere08g0159 275 ProSiteProfiles CCT domain profile. 175 217 IPR010402 GO:0005515
Dere08g0159 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 131 230 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0159 Dere-ChrDere08 3031319 3032866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0159 171 236 C2C2-CO-like Transcription Factor Family AT5G57660 40.909 2.45e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere08g0159 CCT 4.8e-15 CL0281