Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0152 ATGAAGCATTTGATTCGCAGGCTTGCTCGAGTCGCTGACTCCTCTCAGTACACTCTCCTCAGATCCGATTCGCAGAGCCGGCGTCCGCGTCGAGTGGTCGCCGCCTCGAATATCCGCCGGCATCGCACGAGGACTGCTGCTGCGGCGGAAGGTCGCGTGCCGATCTACGTGGGCGACGAGATGCGGAGATTCGAGGTGAGCGCGGAGCTGCTGAACCACCCGATCTTCGTGAAGCTTCTGAACAAATCAGCTCAGGAGTACGGGTACGAGCAGAAAGGCGTGCTCCGAATCCCCTGCCACGTCTTCGTCTTCGAGCGCGTCCTCGAAGCTCTTCGTCTCGGCCACGACGACTCGCGTGACCTCCACGACCTCCTCTGTTCCTCGTCCGAAGAGTTTTGCTAA 402 0.602 MKHLIRRLARVADSSQYTLLRSDSQSRRPRRVVAASNIRRHRTRTAAAAEGRVPIYVGDEMRRFEVSAELLNHPIFVKLLNKSAQEYGYEQKGVLRIPCHVFVFERVLEALRLGHDDSRDLHDLLCSSSEEFC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0152 133 Pfam Auxin responsive protein 8 111 IPR003676 GO:0009733
Dere08g0152 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0152 Dere-ChrDere08 2941816 2942217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0152 43 118 Calmodulin-binding Proteins AT4G31320 39.474 1.53e-15 67.8