Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0144 ATGTATGGAGTGCATTGGATGTGCATCGAAGCCTCGTCCCTACCAGAGCTGCCACGGAGGCCTTCTTTATCTTCTCATCCACCATTTCCTACACCCCTCGCATGCCGCCGTAGGCCTCTCACACTTATGCTATACCACAAGCACAATCCTCCGATGGCTTCCTCCACCCTCTTGTCCTCCAACCCAACGGTTTTCTCTGCCAACAGTTCCTCCTCCTCTTTCCATTTGCCCATGTCCGATCACCATCATTCTCCTCTCTCTCAATCCCCCGCCATTCCCAAATCCTTCAGTGGCCTCTGCAAGCCCTTCCATTCTCGGGTTCCCACCTCCATTTGTCGGCGAGGCTTCTTCGTCAAGGCTACGGTTATAAAGTGGCGATGTCCAAAGCAAATTCTCCCTCCCAACTGGGACACTGAATTCCAGAAGAAAGTCCTGTATCTAGAGTCCATTGGTATTGACTCTTTCTCACTTATGGAAAATCATCCAACAGCAATATCTGCCTCCTCTCTTGCTGATATAAAATCCACTGTGGAATTCATCACTTCCATGGATTTCTCTGCAATTGAGTTCCGGCGCATTGTTGGCATGTGTCCAGAGATTCTCACCTTTAGAGTCTCAGATATCTTGCCTGTGTTCACCTTCCTTCTCCGTGAAGCTCGTGTGAATGGCTCAGATATCAAGCATGTGGTAAATCGTCGTCCTAGGTTGCTTGTCTGCAGTGTTACTGAGCAACTTCGTCCCACCCTATACTTCCTCCAAAGTATCGGCATTGAAGAGGTAAACAGGCACACATATTTACTATCATGTAGTGTTGAAGAAAAGCTTATACCCAGGATTGATTACTTTGAGAATATTGGCTTTTCTCGTCGTGATGTAACTTCAATGTTTCGAAGATTTCCTCAGCTGTTTAACTATAGTATAAAGAACAATCTGGAGCCTAAATACAGTTACTTTGTGGTGCAAATGGGGAGAGATTTGAAGGAGCTGAAAGAATTCCCACAGTATTTCTCATTTAGCTTAGAGAATAGAATCAAACCTAGGCATAAACTGTGTGTAGAAATGGGGGTATGTTTTCCTCTCCCTGTATTGTTAAAGACAAATGAAGTGCATTTTCGTAATAGATTAGATGTATGTGTAAATTCTTCATCACCCTTGAAAACATCTCCTCTATGGTGTTCAAATTGTGATATTAATCAAATATAG 1203 0.4406 MYGVHWMCIEASSLPELPRRPSLSSHPPFPTPLACRRRPLTLMLYHKHNPPMASSTLLSSNPTVFSANSSSSSFHLPMSDHHHSPLSQSPAIPKSFSGLCKPFHSRVPTSICRRGFFVKATVIKWRCPKQILPPNWDTEFQKKVLYLESIGIDSFSLMENHPTAISASSLADIKSTVEFITSMDFSAIEFRRIVGMCPEILTFRVSDILPVFTFLLREARVNGSDIKHVVNRRPRLLVCSVTEQLRPTLYFLQSIGIEEVNRHTYLLSCSVEEKLIPRIDYFENIGFSRRDVTSMFRRFPQLFNYSIKNNLEPKYSYFVVQMGRDLKELKEFPQYFSFSLENRIKPRHKLCVEMGVCFPLPVLLKTNEVHFRNRLDVCVNSSSPLKTSPLWCSNCDINQI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0144 400 FunFam Transcription termination factor MTEF1, chloroplastic 215 379 - -
Dere08g0144 400 SMART mt_12 326 357 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 SMART mt_12 191 222 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 SMART mt_12 293 325 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 SMART mt_12 259 288 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 PANTHER CGI-12 PROTEIN-RELATED 286 376 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 Pfam mTERF 125 218 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 Pfam mTERF 225 371 IPR003690 GO:0003690|GO:0006355
Dere08g0144 400 Gene3D Transcription termination factor 3, mitochondrial 141 379 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere08g0144 mTERF 9.5e-27 No_clan