Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0139 ATGGCATTCATGGTTACCTTGTCTGTTTTGGCATGGTTGTGTCTTCTGGGGAGCACTCTTGGTGCAGTAAGGGACAGTTTGAAGCAAGGTGATGTGCTTGATCACTCAAGCTTCCTATACTCTGCAGGACGCAAGTTCTGTCTGAAATTTGACACGGTTGGATCTGACTCCACCTTGACTTACCTGGTTATAGATCGCAGAGACACTTCCATCAGTGGTCAAGCAGACACCAACGTTGGATATAAGGATTGGATTGCCAATCGAGACGACCCTATTGCCAACAATTCTGGGGCTTTAACTTTGGGGTACTCTGGTGCTCTCACAATTATTCGTCAGAACGGGAATCCCATAACTTTGTATTCTCTTGTCAAGTCTCAACCGACCAACAATACCATTCTCACCCTTTCAGATTCAGGAAACTTGGTCCTGCAAGAGTTGCACCCAAATGGTTCTGCAAAGCATGTGTTGTGGCAGAGTTTTGATCATCCTTCAGATGTATTCCTTCCTGGAATGAAGTTAGGAGTTAATCACAGAACTAATCAATCTTGGTTTCTTACGGCATCTGTTTCTGATGCTGGACCGCATTCAGGCTCTTTTACACTTGAATGGGAACCAAGAAAAAGCCAGTTAATCATAAAGAGGCGAGGACAGATCTATTGGGCAAGTGGTTTGGGGACCAACAAGAGATTTGAGAACATACCAAAGGAAGTTCAGCAATTTTATGAATACAAAATTGTCGCAAATGAGGAGGAACAGTCCTTTAGTTACACCAGTCAATACGATGCATCACAATGGGTGTTGTTTCACACTGGTCTGTTATTGGATACAAGAGGGAGTGATTATGCCATAGCTGGAGCTGATACTTGTTATGGCTACAGTACTGAAGGTGGCTGTCAAAGATGGGAGTTACCCAAGTGTAGGAAGCCTGGTGATACATTCAAAATTAAGTTCGGATATATTGATCATCCATCAGGGAGTGGTGGTTCTGTTGTGACAGACACAGACACTAGTCTTGATGAAGGTGACTGTAAGGCTACTTGCTGGACTAACTGTAACTGCTTTGGGTTCAAAACTGCTTTCACCAATGGAACCGGATGCAAATTTTACCATGGCCCTTGGAAGATAGCACATTTTGTCTCTGCTGACACAAACATTAACATTCTAGTACGGAATGATTCAGTTCACAAAGGTATGAAGTGGATAAAATTTGGTTCTGCCGCAGCAGCAGTAGCTCTGATCATAATCTGCCTTGGGGCCATTTTATACCTAAGACACAGGAGGAAAACAGCTGAAGTTCATGAGGATAAAAGAAGCAGCGAGGAGAATGAACTGCTCGACTTAGTGTCTTTTAATAGAGATAACGCTGCTAATGAACTTCAAAATGACATAAAGAAGAGGAATGATTTAAGAGTTTTCAGCTATTCATCAATCATGGCAGCAACAAACAGGTTCTCACCAGAAAACAAGCTAGGAGAAGGGGGCTTTGGACCTGTATATAAGGGATTATTGCCAATGGGAGAAGAAATAGCTATAAAAAAGCTTTCAAGAGATTCTACTCGTATCAAGCTACTAGATTGGAAAAGGCGTTTCAACATAATTGACGGAATTGCTCAAGGATTGCTCTATCTCCATAAATATTCAAGACTAAAAGTTGTTCATAGAGATCTGAAAGTTAGCAACATTCTTCTTGATGACAATATGAATCCTAAAATTTCAGACTTTGGCATGGCCAGAATTTTCACACAAGAATCAAATGTATATACCAATAGGATTGTTGGAACATATGGTTACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTACCAAATCAGATGTCTATAGTTTTGGAGTTATACTACTTGAAATTGTTAGTGGTAGAAGAAACAACAGCTTGCGCAATGCCCAAGGCCCACTCAATCTAATAGGACTGGCTTGGGAACTATGGAAAGAAGGTCAGGGACTAGAATTAGTTGATCCAACTTTAAGAGACTCATGCATTCAAGATCAAGCATTAAGATGTATTCACATTGGACTTCTGTGTATAGAAGAAAGTCCAGTTGATCGTCCAACTATGTCAGATATTATACCCTTGTTGACCAGTGACAATGCATCACTTCCTCTCCCAAAAAGACCAGCATTTTACAGTGGAAGAAATCTCAATGAGGAATATCAATGTCCTCAAGATTTTGAAACTTATTCAGCGAATGGCTTGTCCATTTCAAACAAAGGGGCAAAATAA 2244 0.4091 MAFMVTLSVLAWLCLLGSTLGAVRDSLKQGDVLDHSSFLYSAGRKFCLKFDTVGSDSTLTYLVIDRRDTSISGQADTNVGYKDWIANRDDPIANNSGALTLGYSGALTIIRQNGNPITLYSLVKSQPTNNTILTLSDSGNLVLQELHPNGSAKHVLWQSFDHPSDVFLPGMKLGVNHRTNQSWFLTASVSDAGPHSGSFTLEWEPRKSQLIIKRRGQIYWASGLGTNKRFENIPKEVQQFYEYKIVANEEEQSFSYTSQYDASQWVLFHTGLLLDTRGSDYAIAGADTCYGYSTEGGCQRWELPKCRKPGDTFKIKFGYIDHPSGSGGSVVTDTDTSLDEGDCKATCWTNCNCFGFKTAFTNGTGCKFYHGPWKIAHFVSADTNINILVRNDSVHKGMKWIKFGSAAAAVALIIICLGAILYLRHRRKTAEVHEDKRSSEENELLDLVSFNRDNAANELQNDIKKRNDLRVFSYSSIMAATNRFSPENKLGEGGFGPVYKGLLPMGEEIAIKKLSRDSTRIKLLDWKRRFNIIDGIAQGLLYLHKYSRLKVVHRDLKVSNILLDDNMNPKISDFGMARIFTQESNVYTNRIVGTYGYMSPEYAMEGIFSTKSDVYSFGVILLEIVSGRRNNSLRNAQGPLNLIGLAWELWKEGQGLELVDPTLRDSCIQDQALRCIHIGLLCIEESPVDRPTMSDIIPLLTSDNASLPLPKRPAFYSGRNLNEEYQCPQDFETYSANGLSISNKGAK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0139 747 Pfam D-mannose binding lectin 84 187 IPR001480 -
Dere08g0139 747 Gene3D - 19 161 IPR036426 -
Dere08g0139 747 Pfam Protein kinase domain 530 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0139 747 ProSiteProfiles Protein kinase domain profile. 395 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0139 747 ProSiteProfiles Bulb-type lectin domain profile. 24 156 IPR001480 -
Dere08g0139 747 SMART serkin_6 484 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0139 747 SUPERFAMILY Protein kinase-like (PK-like) 468 722 IPR011009 -
Dere08g0139 747 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 524 720 - -
Dere08g0139 747 SMART blect_4 30 163 IPR001480 -
Dere08g0139 747 PIRSF SRK 285 522 IPR024171 GO:0004674
Dere08g0139 747 PIRSF SRK 1 277 IPR024171 GO:0004674
Dere08g0139 747 PIRSF SRK 516 746 IPR024171 GO:0004674
Dere08g0139 747 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 185 IPR036426 -
Dere08g0139 747 Gene3D Transferase(Phosphotransferase) domain 1 512 707 - -
Dere08g0139 747 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 508 708 - -
Dere08g0139 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0139 Dere-ChrDere08 2793008 2796598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0139 417 728 Receptor kinase-like Gene Family AT4G23280 47.335 2.59e-89 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere08g0139 Pkinase 3.4e-26 CL0016