Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0138 ATGATTCGTCTTCTATCAACTGCCTCATGTCGTTTTCTGCCTTTTCCGAAAGCCATTGCTGCAAAACCTTCCCAATCATTCGCTTCTGCCATCTGTTCGAGCATATGTCTAGCTGAAGTTCAAGAGGCAGAGGATGACTCTACAGATCAGTCAACAGACGCTGTTCAATTTTTCAGGAAATGGGGTTGTAATGATGATGATTTGGCGAACGTTTTTAAACGTAACCCACAATTGCCCAAGGCTGATATTGCCCTGCTTCAGTCGCATCTCTTTCTGCTAAGTCGCTTGGGTCTTAACGCACTTGACCTGGCAAAGATCATCAGTTCTAGGCCTAGGTTTCTTAGTAGTCGGGTTAATCGTTATTTTGATGAGAGGCTTGCATATCTTAACTCCTTGTTTGAGTCAAAGGAATTGCTTAAGAGAGCCATTGTGATAAACCCTTCACTCTTAACCTATGATTTTAACGACACCATTTAA 477 0.4235 MIRLLSTASCRFLPFPKAIAAKPSQSFASAICSSICLAEVQEAEDDSTDQSTDAVQFFRKWGCNDDDLANVFKRNPQLPKADIALLQSHLFLLSRLGLNALDLAKIISSRPRFLSSRVNRYFDERLAYLNSLFESKELLKRAIVINPSLLTYDFNDTI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0138 158 Gene3D Transcription termination factor 3, mitochondrial 39 157 IPR038538 -
Dere08g0138 158 Pfam mTERF 55 149 IPR003690 GO:0003690|GO:0006355
Dere08g0138 158 PANTHER CGI-12 PROTEIN-RELATED 9 157 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0138 Dere-ChrDere08 2764581 2765057 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere08g0138 mTERF 1.1e-10 No_clan