Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0136 ATGCTTCGACTTCTATCAACAGCCTCACGACGTTTTCTGCCTTTCTCAAAAGCCGTAGCTGCAGAACCTTCGCATCTATTCACATCTGCCACCTGTTCGACCATATGTCAAGCCCAAGTTAAAGAGGCAGAGGATGACTCTATGGATCAATCAGCAGACGCTGTTCAAATTTTTAGGAAATGGGGTTGTAATGATGATGATTTGGGGAAAATTTTTATGCGCAACCCACACTTACGCAAGGCTGATGTAACCCTGCTTCAGTCGAATCTCTCTCTGTTAAGTCGCTTGGGCATGGAGGCGTCTGACCTGGTGAAGATCATCCATTGTAGGCCAAGATTTCTTAGTAGTCGGGTTAATCGTTATTTTGATGAGAGGCTTGCATATCTCAATTCCCTGTTTGAGTCAAAGGATTTGCTTAAGAGAGCCCTTGTGACAAACCCTTCACTCCTAACCTATGATTTTAACGACACCATTAAACCTGCCCTTGCACAATATCAAGAGTTGGGTGTAAATAAAGAAGACTTTCTTTTCATGATCTGTTCTCGGCCCACACTTATTTCAAGGTCTTCATTTAATGAGGAGAAGCTGGAATATATAAGCAAGACAGGGCTATCCAAGGATTCAAAGTTGTATAAATATGTTGTAACAATAATTGGTATCTCTCGACTGGAAACAATTCGTGAGAAGATAGCAAATTTTGCCACGTATGGTTTCTCTGATGATGAGATATTTGAGTTTATTGGGCGGTCTCCTCTTGTCTTGACACTATCAATTGAAAAGGTTCAGAGGAATATGACGTTCATATTGGGCACACTAAAGTTTGAAGCTAAAACAGTTCTTGAGAACCCATATCTCTTGTTTTTTAACCTGGATACCATGTTGAAGCCACGAGTTCTCCTATTAAGGAAGATACAAGACATGGATTCCAAATTAAAATTAACGCAATCGTTAATGACTAGGGCTCTGAGGATGAAAGAGAAGAGGTTTGTTAAGGCGATCATTAAATGTCATCCTAAGGGAGTTGCCAATGAGTTAATGGAGTTCTATTCGAAGGCAAAAGAAGTGAAGAGATTAGCAGGATCATCAAAGAAGTATATTGTTAAAGGATTTCCATTTTGA 1119 0.4004 MLRLLSTASRRFLPFSKAVAAEPSHLFTSATCSTICQAQVKEAEDDSMDQSADAVQIFRKWGCNDDDLGKIFMRNPHLRKADVTLLQSNLSLLSRLGMEASDLVKIIHCRPRFLSSRVNRYFDERLAYLNSLFESKDLLKRALVTNPSLLTYDFNDTIKPALAQYQELGVNKEDFLFMICSRPTLISRSSFNEEKLEYISKTGLSKDSKLYKYVVTIIGISRLETIREKIANFATYGFSDDEIFEFIGRSPLVLTLSIEKVQRNMTFILGTLKFEAKTVLENPYLLFFNLDTMLKPRVLLLRKIQDMDSKLKLTQSLMTRALRMKEKRFVKAIIKCHPKGVANELMEFYSKAKEVKRLAGSSKKYIVKGFPF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0136 372 SMART mt_12 176 205 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 Gene3D Transcription termination factor 3, mitochondrial 117 343 IPR038538 -
Dere08g0136 372 FunFam Mitochondrial transcription termination factor family protein 122 343 - -
Dere08g0136 372 Pfam mTERF 117 329 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 Pfam mTERF 56 134 IPR003690 GO:0003690|GO:0006355
Dere08g0136 372 PANTHER CGI-12 PROTEIN-RELATED 18 337 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0136 Dere-ChrDere08 2758920 2760038 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere08g0136 mTERF 6.1e-31 No_clan