Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0129 ATGGATGGCATGCATACTAGTCAGGGACATTATGACCCAAGTACATCAGAAGTTAAACCTGTACTTAATTTCTCCATACAGACTGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGGGTGAATCTTAGGAAGCCTGTAATTTCCAATGTTGGTGCTCCCAATTATACAACAGGTCATATTAGTCATGCAAGATCTGAAAGTGGATCAGATTTCTCCATGCGTGAAATGGTTGATAGGGGTCCAAAAGAGCTTGATGGAAAAAACACATTATTACATGGAGGCAGATATAATTATGGATCAATTCAATCAATGCCAAGAACTTCCTATAATCAGGAGAATGGTCAATTTATGCATGGGTATGCCTCTTATGGAAGCTCTGATAACTCATCAATGATCATGAAAGTTCTTTGCAGCTTTGGTGGCAGAATATTACCACGACCTGGTGATGGGAAGCTTAGGTATGTTGGAGGTGAAACACGCATTATCTGTTTAAGAAAGGACATATCTTGGCAGGAGCTTTTGGAAAAAACATTGTTAATATATAATCAGGCTCATGTACTTAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTAGAAGATAGAGAAGGATCACAAAAACTTAGGATTTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAATTTGGTCTCAGTAGTGTGGGTGATGATTCTGAGGTTCAGTATGTTGTTGCTGTTAATGGCATGGACTTAGGTTCAAGAAACAACACAAAGCATCTGGGTGCTAGCTCTTCAGCAAATGATATACATGAATTGGACAGGCAAAATATTGAGAGGAAAGCTATTAGAGTTCCTCTAGAATCTATAGGTATCAGCAATTCTCCATTGACTGAAAAATTGGACTTATCATCAACTGGTCAGTCTTTAAAACCATTGCTGCCAACTTCCTCAAATGCTTATGAAACCTATCCACTTAACAGTGACCAGATGATGCACTTTGATGAAACTTTTAGTCAATATCCTATTCATCATGGCATTCACCATGGCCTTATTCCTCCTCAAAATGTTACTTTCATTGAGAATGCTGATACTATGCCTCATCTTGGGCTGATAAATCAACAAGGTATTTTGAATGAAGGTCCTTCATCTAATGGATTACAAGTACTGAACATAACTGCAATGCAGGTGAAGAAAAGGGGTGATAGTTCAGTTCCACAAGTAAGTAACCTCGGGAAAGTTTTATCCTTGGAAACACCATCCCCTGTTCCCACACAGCCAAAAGATGGCATCTTGAAAAATAATTTTACTAAAGCAAAAGTTGCAGTTAACATACCAGAGGGGCATCTACCCTCATTGCCATCAATGAAAAAGGAGCAGCACCAGGAGTATGAAGAGGCCTCTTCCACATCTAGCAGTGCATTTGGTGCTGCTTATGTTGATTCACAGTCCAACAGGATTGATTTAAGTTGTCTTCACCCTCCTCCAATATCTAAGAGAGTTTACTATTCTTATTCTGAAAGAACTCTCAGGGAGCAAGTAGAGTTGCTGAATCGGTCTGCAAAGTCAGATGACACATACGATTCTCAGGTTCCTGTATCAGATTTACTTTCTGATATCAATCTGCAGTATTCAGTTACAGAATCTGGTGACAACTTGCATGATGGAAGTCAGTCTAATTTAACCAAGGGATTGAGCACTGCATCAAAACTCTTGCATGCAGATGGCCAAATCATTGATAATGGGTTTACCAATCAACAGATGTACAAAGTGTTGCCTGGGGCAAGCAGTCAGGTGAAGTCAAAGCTCTCAGAACATGTGGATCCCAAGTCGAAGCAAGTATTACTAAACAATGAAGGAAGTAAAGTTGTGGTAGATGAGGATCAGGTCATTAGGTCAGAGAGTGAAAGTTATTGTAACGGTAACTGCAGCAAGCCCCTAGTAGATGAAAACAAAGACCATAAATCTGATTATCCTGCTTTGGATCAGGTTCCACCTTTTAAGCAAAATGATGATCCAACATCCCATCTTCCAGAGATTAATTGGGGTGATGCCTTGGGGAAGGAATCCAATAATGTTTGTATGGTGCAAGAGGCACCTGTTTCTTCAACTCGGAACACAACTCAAGACATTTCTCAAGGCTTTCCCTTAAATGCTGTTCCCAAACAAGCACAGGGTGACATTCTTATTGATATTGATGATCGGTTTCCTCGTGAATTGCTTTCTAATATATATACTAAAGCAATACTTGCAGAAGACCCGTCCAGTCTACCTCCACTAACTCATATTGGAGTGGGCTTAAGCATAAATTTGGAAAATCATGAACCTACGTCATGGTCATACTTTGGGAAATTGGCACAAGAAGGGCTAGATATCAACTCTCTTATTGACCAGTATCCTCTTGGTTCACCTGCATCTGGAAAAGCAGGAGATAATAAAACTCACCTTGTTACTCCTCTAACAACTATTGGAGTTTCTGTAGACCATGCTGAGTCACACCTCAATATTGAAGAAAATCAAAAGGGCTTTCATGGAATGATTGGAACAGAAACCACTATTCTGCAGTCAGATTATGATCATTCCCAGATGAAGGAGACTGAAAGTATGCAGTTTGATGCCATGATGGAAAATTTAAGAGTACAAGAGTCGGAGTATGAGGACGGGAAGCTTGAAACAAGAAATTGTGGTCTAACTCCACTTGATCCTTCTCTGGAACGTTTTGAAATTAGTACCATTCAGCTCATAAAGAATGAAGATCTTGAAGAGCTGAGGGAGCTGGGTTCTGGGACCTTTGGTACTGTGTATCATGGAAAATGGCGGGGAACAGATGTTGCCATCAAAAGAATAAAGAAAATCTGTTTCACTGGTAGATCATCTGAGCAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAACTTCATCACCCGAATGTTGTGGCATTTTATGGTGTCGTCCAGGATGGACCAGGAGGAACAATGGCAACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCGTGTATTAATTCGCAAAGATAGGTATCTTGATCGCCGCAAGAAGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGACCCTTCTAGGCCTATATGCAAGGTTGGCGATTTTGGCTTGTCAAAAATTAAACGAAATACATTGGTTTCTGGTGGTGTGCGAGGGACCCTACCTTGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGCGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTAAATAACACATTAAGGCCAACAATCTCCGGTTATTGTGATCCTGAATGGAAAACACTGATGGAACAATGTTGGGCACCCAACCCTGCAGCCAGGCCATCCTTCACAGAAATAGCCAGTCGCTTAAGGGTAATGGCTGCATCTGCTAGCCAAACTAAAGCACAGGGTCACAAGGCAACCAAATGA 3648 0.4082 MDGMHTSQGHYDPSTSEVKPVLNFSIQTGEEFALEFMRDRVNLRKPVISNVGAPNYTTGHISHARSESGSDFSMREMVDRGPKELDGKNTLLHGGRYNYGSIQSMPRTSYNQENGQFMHGYASYGSSDNSSMIMKVLCSFGGRILPRPGDGKLRYVGGETRIICLRKDISWQELLEKTLLIYNQAHVLKYQLPGEDLDALVSVSSDEDLQNMMEECNHLEDREGSQKLRIFLFSMSDLEDAQFGLSSVGDDSEVQYVVAVNGMDLGSRNNTKHLGASSSANDIHELDRQNIERKAIRVPLESIGISNSPLTEKLDLSSTGQSLKPLLPTSSNAYETYPLNSDQMMHFDETFSQYPIHHGIHHGLIPPQNVTFIENADTMPHLGLINQQGILNEGPSSNGLQVLNITAMQVKKRGDSSVPQVSNLGKVLSLETPSPVPTQPKDGILKNNFTKAKVAVNIPEGHLPSLPSMKKEQHQEYEEASSTSSSAFGAAYVDSQSNRIDLSCLHPPPISKRVYYSYSERTLREQVELLNRSAKSDDTYDSQVPVSDLLSDINLQYSVTESGDNLHDGSQSNLTKGLSTASKLLHADGQIIDNGFTNQQMYKVLPGASSQVKSKLSEHVDPKSKQVLLNNEGSKVVVDEDQVIRSESESYCNGNCSKPLVDENKDHKSDYPALDQVPPFKQNDDPTSHLPEINWGDALGKESNNVCMVQEAPVSSTRNTTQDISQGFPLNAVPKQAQGDILIDIDDRFPRELLSNIYTKAILAEDPSSLPPLTHIGVGLSINLENHEPTSWSYFGKLAQEGLDINSLIDQYPLGSPASGKAGDNKTHLVTPLTTIGVSVDHAESHLNIEENQKGFHGMIGTETTILQSDYDHSQMKETESMQFDAMMENLRVQESEYEDGKLETRNCGLTPLDPSLERFEISTIQLIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRRVLIRKDRYLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPSRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTISGYCDPEWKTLMEQCWAPNPAARPSFTEIASRLRVMAASASQTKAQGHKATK 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0129 1215 Pfam Protein tyrosine and serine/threonine kinase 934 1196 IPR001245 GO:0004672|GO:0006468
Dere08g0129 1215 SUPERFAMILY CAD & PB1 domains 150 238 - -
Dere08g0129 1215 Gene3D Phosphorylase Kinase; domain 1 926 1020 - -
Dere08g0129 1215 MobiDBLite consensus disorder prediction 460 486 - -
Dere08g0129 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1021 1213 - -
Dere08g0129 1215 Gene3D - 152 235 - -
Dere08g0129 1215 ProSitePatterns Protein kinases ATP-binding region signature. 939 964 IPR017441 GO:0005524
Dere08g0129 1215 Gene3D Transferase(Phosphotransferase) domain 1 1021 1215 - -
Dere08g0129 1215 SMART serkin_6 933 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0129 1215 CDD PB1_UP2 137 233 - -
Dere08g0129 1215 PANTHER SERINE-THREONINE PROTEIN KINASE 179 1197 - -
Dere08g0129 1215 ProSiteProfiles Protein kinase domain profile. 933 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0129 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 153 235 - -
Dere08g0129 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1058 1070 IPR008271 GO:0004672|GO:0006468
Dere08g0129 1215 Pfam PB1 domain 150 233 IPR000270 GO:0005515
Dere08g0129 1215 SUPERFAMILY Protein kinase-like (PK-like) 919 1195 IPR011009 -
Dere08g0129 1215 CDD STKc_MAP3K-like 939 1196 - -
Dere08g0129 1215 PRINTS Tyrosine kinase catalytic domain signature 1167 1189 IPR001245 GO:0004672|GO:0006468
Dere08g0129 1215 PRINTS Tyrosine kinase catalytic domain signature 1015 1028 IPR001245 GO:0004672|GO:0006468
Dere08g0129 1215 PRINTS Tyrosine kinase catalytic domain signature 1052 1070 IPR001245 GO:0004672|GO:0006468
Dere08g0129 1215 PRINTS Tyrosine kinase catalytic domain signature 1123 1145 IPR001245 GO:0004672|GO:0006468
Dere08g0129 1215 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 926 1020 - -
Dere08g0129 1215 SMART PB1_new 148 235 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0129 Dere-ChrDere08 2693006 2699866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0129 482 639 MAP Kinase Kinase Kinase AT1G16270 30.189 6.97e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dere08g0129 PK_Tyr_Ser-Thr 1.1e-61 CL0016