Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0127 ATGGAACAATCTAGAATGCAGAAACATCAATACAACACCATGGAACCTAGAAATGAGGAATTCCATTCTGCACCACAGTCAACTGTGCAGGACCATCTGGATGGCATGCATATAAATACAAGACCTGCTGACCATAATATGTCATATAAAAAACCTGTACTTAATTACTCCATTCAGACTGGTGAGGAATTTGCTCTAGAGTTCATGCGAGATAGAGTGAATCTCAGGCAGCCTGTCTTTCCACATATCATGGGTGATCCCAATTATGCAACAGGTTATATGGAATTGAAAGGCATTTTAGGCATTAGTCATTCAGGATCTGAAAGTGGATCAGATATTTCTATGCTCCCAAAAGTTGAAAGAGGTCCCAAAGAATTTGACAGAAGAGTCTCCTCTATGCACCAGGACAAAAGCAATTATGGGTCAGTTCGGTCAATACCTAGAACTTCATCTAATCAGGACAGTAACCGAGTTCTTCACGGTCTTGTCTCTTCTGGGGCTTCTAGTGGCTCATCAATGAAGATGAAGGTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGGCCAAGTGATGGAAAGCTTAGATATGTTGGAGGTGAAACACGTATTATTTGTATCAGAAAGGACATAAGTTGGCAGGAGCTTATGGAGAAAGTCTTATCAATCTATAATGAGACTCATGCTATAAAGTATCAGCTCCCTGGAGAAGACCTCGATGCCTTGGTTTCAGTATCTTGCGATGAGGATCTGCGGAATATGATGGAGGAATGCCACGATCTAGGAAACAGAGAAGGAACACAAAAGCTTAGGATGTTTCTGTTTTCCATGAATGATTTGGAAGATCCTAGTGTTGACGGTGATACTGAAATCCAGTATGTAGTTGCTGTTAATGGCATGGACTTCGGATCAAGGAACAATTCAACCCTTCACGTTGCAAGTGCTTCTGCAGATAATATACATGAAATGGATGGACAAAATATTGAGCGAGTGGCTGGTAGAGCTCAGATAGAATCAACTGGTGTCACTAGTTCTTCCTTGACTGCGAATGTTACTTCATTGGGAATTCAGTCCTCACAACCAATGTTATCAACTTCCTCAAATGCTTATGAAAGCAATCCATTGTTTCATGGTAGCCAACATGTGGAAGCCAGTCAGTATCCAGTGCACTATGGCTTTGACCCTTCCAATGACTTAGCTTTTAGACAGATTCCAATTTCTGTGCCTACCGTCAATGCAGGCCATGGACCTGCCAATCAAGGAATTATCAATGAAGGGCATTCACCTGGTGAGTTGCAAGTACAAAATTCAGAAATGTTAGCAATGCAGGTAAAGAAAATGGGTGACAGTTCCATTAAGCGTGAAAGTGACTCTGGAAAAGGCTTCTCCTCCGAAATGCCATATCCTGTTCCTTCACAGCCATTGGATGGCAACTTACAGGGTAATTTTTCTGAAGCATTAGTTACAAATGCTGTAACAGGGGTGCATCTACCCAAATTGCCTTCAAAAAGCAAGGGCAAGCACCAACATTATGAAGAGGCCTCTTCAATGGTTAATACAATGAATTCCACACAGATTCCAAAGTCTGGTGAAGATGACTCTTATTCTACCTCTACTAATGCTTTCAGTCCTTCTTATGTTGATGCTGAGTCCAATGTGATTGATTTGACTTGCCTGGAGCCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCCAGGGAGCAGGCAGATTTGTTGAACCGATCCACAAAGTCAGATGATGCACATGGTTCTCATTTGCTCATGTCAGAGTTACTTTCTGACTTCAACCAGCAGAATTCAGTGACAGAATCAATTGATAAATTTGAGGTTGGAAATCTGTCAAACCTGACTGCAGTGTCCAGCATGACAACACAACCATTGCATGCAAATGGCCATGCCATTGAGGATGGGCTAGCCCAGCTACAAAATCGCAAGCAGTTGCCTGATGCAACAAGTATGATGAATTCAAAGTTATTACAGTCCATGGATTCAGAGTTGAAGCCAGTAGTGGCAAGTAACACAGATAATAAAGTTGCTGCAAATGAGGATCGGGTCCTTAGGTCTGAGAATGAAACCAATTCCTCCAAAGATAACCGTAACAATCGCCTAGTTGATGAAACCAACAGGACTGAACAACCTGCATTTCGCAAGGTTCCGTCTTTTGAGCATAATGAGAACCTAGGATCTAATCTTCCTGACCTTAATTTGGGTGAGGCTCCTACCAAAGAATCCAGTAAAGATGCTAAGGTCCAACCACAGCCCTTTTCTATATCTGGGAACACAAACCAAGTTGTTTCTCAAGGTTTACCCTCAGATACTGCTACTACACCAGCTCAGGGTGATATTCTGATTGATATTGATGAGAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAGGCAATACTACCTGAAGATTCCTCACATATTAGTCCATTACCAACTGATAGAACAGGCTTGAGCTTAAACATGGAAAATCATGAGCCCAAACATTGGTCATATTTTCAGAAGTTGGCAAATGAAGGGTTTGATAATGTGTCTCTAATTGATCAGGATCATCTTGGTTTATCATCTGCATTAAGAAGAGTACAAGAAGGAGATAGTAGATCTCAGGAAGTTGCACACTTACGGGCTGATGGAGTTTCAGGAGGCCATAAAGAACCTGGCCGCAATTTTGGTGAAGAAAAGCTGAAAAATTTACCTGTAACAACTAGAACAGAGGCTGCTGTTCTGCATCCAAACTATGATCATACTCAACTTATGGAGACTGATAACAAGAACCTGGATCCTATAAAGGGAAACATAAGACAAAAAGAGTCTGAGTATGAGGATGGCAAGAATGAAACAAGGAATATTGGTCTCCCACACGATCCTTCTTTGGAGGATATTGATTTCAGTACTTTGCAGCTTATAAATAATGAAGATCTTGAAGAGCTAAAAGAATTGGGTTCAGGAACCTTTGGGACTGTGTACCACGGTAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCTTCTGAACAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAACTTCATCACCCAAATGTGGTGGCATTCTATGGCGTAGTGCGGGACGGACCCGGAGGAACATTAGCCACTGTTACAGAGTTCATGGTGGATGGTTCTCTAAGGCATGTTTTGCTTCGCAAGGATAGGTATCTAGATCGCCGTAAGAGGCTGATAATTGCCATGGATGCAGCTTTTGGAATGGAGTATTTGCACTCAAGGAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTAAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAAAGGAATACCCTGGTTTCCGGTGGTGTGCGTGGAACCCTACCTTGGATGGCACCAGAGCTTTTGAATGGCAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTATGGGAGATTCTTACCGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATAATAGGAGGTATTGTAAATAACACATTAAGGCCAACAATCCCCAGTTATTGCGATCCTGAGTGGCGACAACTAATGGAGCAGTGTTGGGCACCTAACCCTGGAGCCAGGCCGTCCTTCACAGAAATTGCTCGCCGCTTAAGGGTGATGTCTGCAGCTGCTAGTCAGACCAAAGGGCAGGGCTACAAGGCATCTAAATGA 3807 0.4237 MEQSRMQKHQYNTMEPRNEEFHSAPQSTVQDHLDGMHINTRPADHNMSYKKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPHIMGDPNYATGYMELKGILGISHSGSESGSDISMLPKVERGPKEFDRRVSSMHQDKSNYGSVRSIPRTSSNQDSNRVLHGLVSSGASSGSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIICIRKDISWQELMEKVLSIYNETHAIKYQLPGEDLDALVSVSCDEDLRNMMEECHDLGNREGTQKLRMFLFSMNDLEDPSVDGDTEIQYVVAVNGMDFGSRNNSTLHVASASADNIHEMDGQNIERVAGRAQIESTGVTSSSLTANVTSLGIQSSQPMLSTSSNAYESNPLFHGSQHVEASQYPVHYGFDPSNDLAFRQIPISVPTVNAGHGPANQGIINEGHSPGELQVQNSEMLAMQVKKMGDSSIKRESDSGKGFSSEMPYPVPSQPLDGNLQGNFSEALVTNAVTGVHLPKLPSKSKGKHQHYEEASSMVNTMNSTQIPKSGEDDSYSTSTNAFSPSYVDAESNVIDLTCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSELLSDFNQQNSVTESIDKFEVGNLSNLTAVSSMTTQPLHANGHAIEDGLAQLQNRKQLPDATSMMNSKLLQSMDSELKPVVASNTDNKVAANEDRVLRSENETNSSKDNRNNRLVDETNRTEQPAFRKVPSFEHNENLGSNLPDLNLGEAPTKESSKDAKVQPQPFSISGNTNQVVSQGLPSDTATTPAQGDILIDIDERFPRDFLYDMFSKAILPEDSSHISPLPTDRTGLSLNMENHEPKHWSYFQKLANEGFDNVSLIDQDHLGLSSALRRVQEGDSRSQEVAHLRADGVSGGHKEPGRNFGEEKLKNLPVTTRTEAAVLHPNYDHTQLMETDNKNLDPIKGNIRQKESEYEDGKNETRNIGLPHDPSLEDIDFSTLQLINNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVRDGPGGTLATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSRNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDPEWRQLMEQCWAPNPGARPSFTEIARRLRVMSAAASQTKGQGYKASK 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0127 1268 CDD PB1_UP2 178 274 - -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 948 968 - -
Dere08g0127 1268 Gene3D - 193 276 - -
Dere08g0127 1268 Gene3D Transferase(Phosphotransferase) domain 1 1074 1267 - -
Dere08g0127 1268 CDD STKc_MAP3K-like 992 1249 - -
Dere08g0127 1268 PRINTS Tyrosine kinase catalytic domain signature 1105 1123 IPR001245 GO:0004672|GO:0006468
Dere08g0127 1268 PRINTS Tyrosine kinase catalytic domain signature 1176 1198 IPR001245 GO:0004672|GO:0006468
Dere08g0127 1268 PRINTS Tyrosine kinase catalytic domain signature 1068 1081 IPR001245 GO:0004672|GO:0006468
Dere08g0127 1268 PRINTS Tyrosine kinase catalytic domain signature 1220 1242 IPR001245 GO:0004672|GO:0006468
Dere08g0127 1268 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1074 1266 - -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 1 26 - -
Dere08g0127 1268 SMART serkin_6 986 1252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0127 1268 Gene3D Phosphorylase Kinase; domain 1 979 1073 - -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 135 156 - -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 689 727 - -
Dere08g0127 1268 SUPERFAMILY CAD & PB1 domains 190 280 - -
Dere08g0127 1268 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 194 276 - -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 680 767 - -
Dere08g0127 1268 ProSiteProfiles Protein kinase domain profile. 986 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0127 1268 SMART PB1_new 189 276 IPR000270 GO:0005515
Dere08g0127 1268 PANTHER SERINE-THREONINE PROTEIN KINASE 219 1250 - -
Dere08g0127 1268 SUPERFAMILY Protein kinase-like (PK-like) 977 1248 IPR011009 -
Dere08g0127 1268 MobiDBLite consensus disorder prediction 128 156 - -
Dere08g0127 1268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1111 1123 IPR008271 GO:0004672|GO:0006468
Dere08g0127 1268 MobiDBLite consensus disorder prediction 948 967 - -
Dere08g0127 1268 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 979 1073 - -
Dere08g0127 1268 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Dere08g0127 1268 Pfam Protein tyrosine and serine/threonine kinase 987 1249 IPR001245 GO:0004672|GO:0006468
Dere08g0127 1268 ProSitePatterns Protein kinases ATP-binding region signature. 992 1017 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0127 Dere-ChrDere08 2683768 2689866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0127 23 613 MAP Kinase Kinase Kinase AT1G16270 38.889 4.47e-102 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dere08g0127 PK_Tyr_Ser-Thr 3.9e-62 CL0016