Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0126 ATGGAAGATGTGAACATCTGGCTATCCTTCTCCATGAATGAGAATTTCAACCATGATTTCGCCATCCGAAGGTTCTGTCCTGCGAGAATGGAGCAAGAGCAAGGAGATCAGAGCCATGATCATCAAGAAGCACTGGCAAAAACAATACCTGATGAAACTGAACTGTGTACCACTAGCACTCCATGTTTGGCTTCTTCAGATGTTGATGACTTTGTTGATAGCTTCATCAATATGGACCAGCATGATAATGAAGAGTATGCCAATGAAGAAGATCAAGATCAAGAGCCACATGAGAATCATCATCAAACTTATAATCACTACATGGTGAATTATGATGAGATTGATCCATTCTCTATGATGAATGAAGAAGCATATGGGTATGTTCCAATCACAATGGAGGAAGAAGAAATGGAAATGAAGGGCTCCTTTGGTGCAGAAGAGATGAGCCTTGGTGTGGACCAGGGGCTAGATTTGGTTCACATGCTGTTGGCTTGTGCTGAGGCTGTGGGCTGCAGAGACACTCAACAAGCAGACTTGCTGCTGGAAAAAATTTGGGCTTTGGCTAGTCCTTGGGGTGACTCATTACAGAGAGTCTCCTATTGTTTTGCTTCAGGATTGAAGTGTAGATTGTCACTTCTTCCTCACAATGTCTCTGCAAATAGTACGGTAAGAGATGGTACTACTATGGATGCCTCTTTGGTCACTAGGGAGATGAAGTTGGAAGCTTTTCAGCTCCTTTACCAAACTACACCTTATATTGCTTTTGGTTATATGGCTGCAAATGAAGCTATATGCCAAGCATCACAAGGGAAGAGCTCTTTACATATAATTGATCTAGGAATGGAACATACCCTTCAATGGTCTTCCTTGATTAGGGCTCTTGCCTCGAGGCCTGAGGGGCCTCCAGGGCTCCGAATCACCGGGTTAATCAGTGATGATGACGATGAACTGAAACTTCAATCTAGCATTAGTTTGCTTGTGGAGGAAGCAAGCTCATTTGGTATAGCCTTGGAATTCCACACAATATCAGAGCCTGCAACTCCATCTCTTCTAACTAAGGAGAAGCTGAATTTGAGAGAAGGAGAAGCCTTGTTTGTTAATAGCATACTGCAATTGCACAAGTATGTCAAAGAAAGTAGAGGCTATCTCAAGGCAATTCTCCAATCAATCAAGAAGTTAGGTCCCACTGCTCTTACTGTGGTAGAGCAAGACTCAAACCACAATGGGCCTTTCTTCCTAGGGAGGTTTCTGGAATCAGTACACTATTACTCTGCCATTTTTGATTCTCTTGAGGCAGCTATGTCGAGAAATAGCCAGCAGAGAATGAAAATAGAAAGATTACACTTTGCAGAAGAGATTGGCAATATTGTAGCTTATGAGGGGCCGGATAGGATTGAAAGGCATGAAAGTGTAGATCGATGGCGAAGGCAATTAGGCCGAGCAGGGTTTCAAGTCATGGCACTAAAGTGCACAAGTCAAGCTAGAATGATGCTTTCTGTGTATGACTGTGATGGATATACGTTGTCCAGTGAGAAGGGTTGCCTTCTGCTTGGGTGGAAAGGAAGGCCAATAATGATGGCTTCAGCTTGGCAAGTAGCAACTTTGTAA 1608 0.4322 MEDVNIWLSFSMNENFNHDFAIRRFCPARMEQEQGDQSHDHQEALAKTIPDETELCTTSTPCLASSDVDDFVDSFINMDQHDNEEYANEEDQDQEPHENHHQTYNHYMVNYDEIDPFSMMNEEAYGYVPITMEEEEMEMKGSFGAEEMSLGVDQGLDLVHMLLACAEAVGCRDTQQADLLLEKIWALASPWGDSLQRVSYCFASGLKCRLSLLPHNVSANSTVRDGTTMDASLVTREMKLEAFQLLYQTTPYIAFGYMAANEAICQASQGKSSLHIIDLGMEHTLQWSSLIRALASRPEGPPGLRITGLISDDDDELKLQSSISLLVEEASSFGIALEFHTISEPATPSLLTKEKLNLREGEALFVNSILQLHKYVKESRGYLKAILQSIKKLGPTALTVVEQDSNHNGPFFLGRFLESVHYYSAIFDSLEAAMSRNSQQRMKIERLHFAEEIGNIVAYEGPDRIERHESVDRWRRQLGRAGFQVMALKCTSQARMMLSVYDCDGYTLSSEKGCLLLGWKGRPIMMASAWQVATL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0126 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 112 530 IPR005202 -
Dere08g0126 535 ProSiteProfiles GRAS family profile. 149 531 IPR005202 -
Dere08g0126 535 Pfam GRAS domain family 158 531 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0126 Dere-ChrDere08 2680841 2682448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0126 153 532 GRAS Transcription Factor Family AT1G66350 38.961 9.55e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere08g0126 GRAS 9.3e-107 CL0063