Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0095 ATGGTAGTTGCTAAGGGAAAATCTAAAGTGGGTATAACCCGGGTCGTTGAAGACGGTCTACCTCGTAAAAATGGTATACGAGAGGGTACTAATCTTGGTCCTTTGTCAGCAAAACTGCAAGAGAAGCCAATAAGGAGTGCTCTGGTAGCTAACAAAGGCGTTATCCTGAATTCTGCAATTAATTCGAAGGGTGGCATCAGAAGTATGGATAAAAGCAGTGGAAAATATGCCAATATGGATGTGAGAAAGGCATTGGCTGATATTAGCAATGTTCAAGGCAACTCTGCAAGGAATATTAAACAGGATGCCTCTAAAATGAAGGTTGTAGCAAGTGCAGGCACAAGGTTAGAAGATGCCTCTTTGAGGAAGTCCTTTACGGGGAGACTGCAAAGAGATATAAGTCATGGTGATGTTCGGTTAGGTGCTTCTAGGAGAGTTAGCACTAGTTTGATAGCACCCTTAGGTGCTCAGAAGAATAATAAAAATGGTGGAAGATCATCTGTTGTCACAGGGGACAGGACTTCAAGGAAGTCTCTTTTACCTACAACTACAAGGAAGTCTTTACCAGTGCCAAGGAGGGTAAACAGGGAAGATAGCAACACAAAGGATAATGCTAGAAGTTCTGAAACGGCAGACAAAATAAGTGGGATCCCATCCAAGGCATCAACAGTGAGAAAAGTTGGTTCCCAGCCATCTAGTGCAAGAAGCCATCTGTGGAAGACTCGAGTGAGTGACGGCTTTGTTCATATTAATCAGGGATCCAGGGTTAAAATCAATGTTTTACATGAATCATCAAGAAAGTCCTGTAAGCCACTTGTTAAGACCACACTTAAGGCTTCTAACGCTCTAAGGACTAGAAAGTCTAAGTCCAAATTAGGTCAGAACAAATCAACATCAGCTGCTGCAATTTCATCACAGGATGAGGAAGCAATTGCTTTGTCTCATCCTGAGAATAATTTAGCGGTAGTTTCTAATGATGCAAATGAAGGGCCATTACCATCTTGTGGAGACAGCAATCTGAAAACAAATTCGATGGAGATAATTGGCAGGAAAAAGTCCACCCGTCGGAAATCTTATACAACTTTATTAATGGAAAGATCTAAGTTTCTGAAGGAAAGTGGTGAAGTAACAGAGCAACATAACCTACCAAATATCGATGATGAATGCAATCAACTAGAAGTTTCTGAATATATTGATGAAATATATCAGTACTACTGGGTTTCTGAGGGACAAAATTCAGCTCTGGCAAATTATAAGTCAATTCAGACAGACATTACACCTCATATGCGGGGCATATTGATTAACTGGTTAATTGAAGTACACTTCAAATTTGATTTGATGCCAGAAACTCTGTATCTCACAGTTTCATTGCTGGATCAATATCTATCTCTGGTGACAATTAAAAAGAATGATATGCAGTTAGTTGGTCTGACTGCACTTTTGCTGGCCTCAAAATATGAGGATTTTTGGCATCCAAGGGTCAAAGATTTAATAAGCATTTCAGCTGAGTCATATACAAGAGATCAAATGCTTGGAATGGAGAAGCTGATTCTTAGAAAATTGAAGTTCCGTCTTAATGGCCCCACTCCTTATGTTTTCATGGTGAGGTTTCTGAAGGCTGCTCATTCAGATATTAAGCTGGAACACTTGGCATTCTTTCTCATTGAGCTGTGCTTAGTTGAATATGAAGCTTTAGCATTCAAGCCTTCGTTGCTATGTGCATCTGCTATCTATGTTGCTCGTTGCACCCTGCAAATTACCCCACCATGGACTCCATTGCTTCACAAGCATGCTCGTTACGAAGTTTCCCAAATCAGGGCTTGTGCGGAGATGATATTGAAGTTCCATAATTCTGCTGGAACAGGAAAGTTGATGGTTACATATGAAAAGTACTCGAGGCCTGAACTCAGTGGGGTTGCAGCAGTGAAACCGTTGGATAGTCTTCCTCTTTGA 1953 0.4081 MVVAKGKSKVGITRVVEDGLPRKNGIREGTNLGPLSAKLQEKPIRSALVANKGVILNSAINSKGGIRSMDKSSGKYANMDVRKALADISNVQGNSARNIKQDASKMKVVASAGTRLEDASLRKSFTGRLQRDISHGDVRLGASRRVSTSLIAPLGAQKNNKNGGRSSVVTGDRTSRKSLLPTTTRKSLPVPRRVNREDSNTKDNARSSETADKISGIPSKASTVRKVGSQPSSARSHLWKTRVSDGFVHINQGSRVKINVLHESSRKSCKPLVKTTLKASNALRTRKSKSKLGQNKSTSAAAISSQDEEAIALSHPENNLAVVSNDANEGPLPSCGDSNLKTNSMEIIGRKKSTRRKSYTTLLMERSKFLKESGEVTEQHNLPNIDDECNQLEVSEYIDEIYQYYWVSEGQNSALANYKSIQTDITPHMRGILINWLIEVHFKFDLMPETLYLTVSLLDQYLSLVTIKKNDMQLVGLTALLLASKYEDFWHPRVKDLISISAESYTRDQMLGMEKLILRKLKFRLNGPTPYVFMVRFLKAAHSDIKLEHLAFFLIELCLVEYEALAFKPSLLCASAIYVARCTLQITPPWTPLLHKHARYEVSQIRACAEMILKFHNSAGTGKLMVTYEKYSRPELSGVAAVKPLDSLPL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0095 650 MobiDBLite consensus disorder prediction 151 237 - -
Dere08g0095 650 MobiDBLite consensus disorder prediction 190 209 - -
Dere08g0095 650 Gene3D - 414 520 - -
Dere08g0095 650 Pfam Cyclin, N-terminal domain 400 526 IPR006671 -
Dere08g0095 650 CDD CYCLIN_CCNB1-like_rpt1 394 523 - -
Dere08g0095 650 FunFam putative cyclin-B3-1 isoform X3 524 649 - -
Dere08g0095 650 PANTHER CYCLINS 354 632 IPR039361 -
Dere08g0095 650 MobiDBLite consensus disorder prediction 210 237 - -
Dere08g0095 650 MobiDBLite consensus disorder prediction 151 189 - -
Dere08g0095 650 Pfam Cyclin, C-terminal domain 528 643 IPR004367 -
Dere08g0095 650 Gene3D - 521 649 - -
Dere08g0095 650 SMART cyclin_7 435 519 IPR013763 -
Dere08g0095 650 SMART cyclin_7 532 614 IPR013763 -
Dere08g0095 650 FunFam Cyclin N-terminal domain containing 2 415 523 - -
Dere08g0095 650 SUPERFAMILY Cyclin-like 528 648 IPR036915 -
Dere08g0095 650 CDD CYCLIN_AtCycB-like_rpt2 528 644 - -
Dere08g0095 650 SMART Cyclin_C_2 528 645 IPR004367 -
Dere08g0095 650 SUPERFAMILY Cyclin-like 390 526 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0095 Dere-ChrDere08 2276782 2284490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0095 57 650 Core Cell Cycle Gene Families AT1G16330 48.355 4.31e-172 504