Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0091 ATGTTTCAGTCTACCACCATGTCTCTCTCACGCCCCACTTTTCCCTCTCCTGTCACTCCAGCAACTTCATCAGTTGGACCCAATGCAGAGAATCAAGTTCAGAGTAAACCAAAAGTTATGTTTGGGGGGAATAAAGAAAGAATAAAGAAGATGCTGGACAAAGTCGAGCTCTCAGTGTCTTCTTATGACACAGCTTGGGTAGCTATGATCCCATCACCTTCTTCCCCACAAGCTCCTCTGTTCCCTCAGTCCCTAAACTGGTTATTGGAAAATCAACTAAGTGATGGGTCATGGGGCCTTCCTGATCGCAATGACTTATTGACTAAAGACTCTCTTCTATCTACCTTGGCATGTGTCCTGGCCCTCAAGCATTGGGGTGTTGGCGAGCAGCAAACTATTAAAGGACTTCAATATATTGAGTCGCACATTGCTTCAGCTTATGATGATAAGCAACATTCTCCAATTGGATTTGATATTATGTTCTCTCATTTGATTGAGAATGCCCATAAATTGGATCTAAATCTTCCTCTTAGAGGGGAGCGTCTGGAGTCACTCATCCAAAAGAGAGAATTGGAGCTCAAACGAGGTTGGGCTGGAAGCAATTCAGAAGGATGGAAAGCATATTTAGCATATATTTCAGAAGGATTGGGAAATTCTCAAGACTGGGAAATGGCTATGAGATATCAAAGAAAGAATGGGTCTTTATTCAACTCACCAGCCACCACTGCAGCTGCCTTTACTCACCTTAACAATAAAAAGTGTTTCGATTATCTACTTTCACTGTTAGATAAATATGGGAATGCTGTTCCAACTGTGCATCCTTTTGATGTCTATGCTCGAATCTATATGGTTGATAGTCTTGAAAAGTTAGGTATTGATCATCATTTTCAAGAGGAAATCCATAGTGTATTGGATCAAATATACAGATTGTGGCAACATGAGGAGGATGATATATTTTTTGAACCCACCACATGTGCCATGGCATTTCGTTTACTACGTTTGCATAGATATGATGTTTCTTCAGATGCACTAAATAGATTTTCAGAGGACAAATTCTCCAATACCCTTCAAGGATATTTGAAGGATGCTAATGCTGTTTTGGAGCTACACAAGGCTTCACAAATAGTTCTTCATTCGGATGATTCTGTTTTGGAGGAACTAAACTCCTGGACAAAACAATTCCTTGAGGAATATTTGTCTTCTTCCTCAAGAAATATTCAAAAACCTCTGAATCATATTGACCACGAGATACGTTTTGCTCTGCGATATCCTCATCACACTTATTTAGATCGTATGTTCAACCGAAACATTATGGAGAATTACACGGTTGATCAAAAGAGAATCTCGAAAACATCATATAGTTCTGTGAACCTCGCAAACAAGGAATCCTTAGAGTTGGCAGTGGAGGACTTCAATAGCTGCCAATTGATAATTCGTGAAGAATTCGAGCAATATAATAGGTGGTTTATGGAGAGTGGAATGGACAAACTACAGTTTCCCAGACCAAAAGTGGCCTATTCCTTCTTGACAGCTGCAGGAACACATGTCGAACCTGAGCTTCGTGAAGCTCGTCTATCATGGGCCAAGAATGGCCTCCTCGTATGTGTTTCTGATGACATGTACGATGTTTGGGGCTGTGAAGAAGACCAGATAAGGCTCGTCGAACTAATGGAGAAGTGGGACGTAGATATCGAGAAAGAAAACTGTTCCGAGCCAGTCAAAATATTATTCTTAGCACTGAAGGGAACAATTTGTGAGATTGCAGACCAAGCAATAAAGGTTCAAGGACGAAGTGTGTTGAACCACTTGATCCAACTTTGGGTGGATGTGTTGCGTTCTTTTCTTCAGGAAGCTCAGTGGCGAAGAAACAACTATGTGCCAAGCTATGAAGAATATTTGCCTAACTCTTTAATATCATTCGCCTTAGGACCCATTCTGCTTCCAGGACTCTATCTTGTTGGACCAAAGCTTCCACAGGAGACTATTGAAAGTGATGAATACAATCGCCTCTTCGACATCGTTAGCATTTATGGACGATTGCTCAATGATATCAATGGCTATAAAAGAGAAATGGAACAAGGGAAACTGAACGCAATAGCGTTGCGAATGATTTATGGATCAGTAAGTGAAGGAGAGATTGTGAAGAAGGTGAAGTATGAGATTGATGAGAACAGAAAGGAGCTTTTGAGAATGGTTATGCAAGAAGAAGGAAGCATAGTTCCAGGCGATATCAAGGATGTCATATGGAAGATGGCCAGATCGCTGCACGTGATCTACAAGAAAGAAGACGTCATACATGCACGTGACTTGTCCGACGAGGTCATCAATATTAAAGACGCAGTAGTCAGCGATCCTATTGTTTTGAAATGA 2370 0.4101 MFQSTTMSLSRPTFPSPVTPATSSVGPNAENQVQSKPKVMFGGNKERIKKMLDKVELSVSSYDTAWVAMIPSPSSPQAPLFPQSLNWLLENQLSDGSWGLPDRNDLLTKDSLLSTLACVLALKHWGVGEQQTIKGLQYIESHIASAYDDKQHSPIGFDIMFSHLIENAHKLDLNLPLRGERLESLIQKRELELKRGWAGSNSEGWKAYLAYISEGLGNSQDWEMAMRYQRKNGSLFNSPATTAAAFTHLNNKKCFDYLLSLLDKYGNAVPTVHPFDVYARIYMVDSLEKLGIDHHFQEEIHSVLDQIYRLWQHEEDDIFFEPTTCAMAFRLLRLHRYDVSSDALNRFSEDKFSNTLQGYLKDANAVLELHKASQIVLHSDDSVLEELNSWTKQFLEEYLSSSSRNIQKPLNHIDHEIRFALRYPHHTYLDRMFNRNIMENYTVDQKRISKTSYSSVNLANKESLELAVEDFNSCQLIIREEFEQYNRWFMESGMDKLQFPRPKVAYSFLTAAGTHVEPELREARLSWAKNGLLVCVSDDMYDVWGCEEDQIRLVELMEKWDVDIEKENCSEPVKILFLALKGTICEIADQAIKVQGRSVLNHLIQLWVDVLRSFLQEAQWRRNNYVPSYEEYLPNSLISFALGPILLPGLYLVGPKLPQETIESDEYNRLFDIVSIYGRLLNDINGYKREMEQGKLNAIALRMIYGSVSEGEIVKKVKYEIDENRKELLRMVMQEEGSIVPGDIKDVIWKMARSLHVIYKKEDVIHARDLSDEVINIKDAVVSDPIVLK 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0091 789 Pfam Terpene synthase family, metal binding domain 464 727 IPR005630 GO:0000287|GO:0010333|GO:0016829
Dere08g0091 789 Gene3D - 50 471 IPR036965 GO:0010333|GO:0016829
Dere08g0091 789 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 44 766 - -
Dere08g0091 789 SUPERFAMILY Terpenoid synthases 464 762 IPR008949 -
Dere08g0091 789 Gene3D Farnesyl Diphosphate Synthase 474 788 IPR008949 -
Dere08g0091 789 FunFam cis-abienol synthase, chloroplastic 58 262 - -
Dere08g0091 789 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 231 444 IPR008930 -
Dere08g0091 789 FunFam Ent-kaur-16-ene synthase, chloroplastic 474 788 - -
Dere08g0091 789 FunFam Ent-copalyl diphosphate synthase, chloroplastic 254 471 - -
Dere08g0091 789 Pfam Terpene synthase, N-terminal domain 221 421 IPR001906 GO:0010333|GO:0016829
Dere08g0091 789 SFLD Terpene Cyclase Like 1 N-term 42 454 - -
Dere08g0091 789 Gene3D - 58 262 - -
Dere08g0091 789 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 61 249 IPR008930 -
Dere08g0091 789 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0091 Dere-ChrDere08 2192291 2197294 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0091 08 2192291 2197294 Dere08g0091 08 2192291 2197294 ECH