Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0088 ATGGAGATTCAGATCCCGTACTCCATCATCTTCACCTTCTTCTGCATCTTTCTTGTGATATACAGGCTATCAAGTTCCAAGAAACGCATAAAAAACCTACCCCCAGGACCACCCAAATTACCTATCATAGGAAACCTGCATCAACTTGCTGGACCGCTACCCCATCGAATTCTGAGAGACCTAGCCAACAAATATGGACCCTTGATGTACCTTAAACTCGGAGAGACCTCCAATGTCGTAGTGACTTCCCCAGAAGTAGTCAAAGAGATCACGAAAACCCATGATCAGATCTTCGCTAACAGACCCAGAATTCTTGTCAGCGAGGTCTTCTGCTACAACAGCACAGACCTCGTCTTTTCCCCATATGGAAGCTACTGGAGGCAACTTCGAAAGATTTGCACTTTGGAGCTTTTGTCCGCGAAGAGGGTCCAATCCTTCAGAAAAATAAGGGAAGAGGAGGTATCAGCACTTGTCCAGAACATATCCGAACTGGAAGGTTCCATCGTCAATCTCAGTAAGAAAATATCCCCACTCACGAATTCCATAGTCGCAAGAGCAGCCTTTGGGAAGAAGACAAAGAACGTGGAAGAAATCCTGTCAACTTTGGAGTATACGATAGAGTTGGCGAGTGGTTTCGCAGTTTCTGATCTGTACCCTTCGCTCAAATTCCTTACCGTGATAAGTGGGACCAAAGCTAAAGTTGCGAAGGCACACAGAGACGTTGATAGGTTGCTTGGAAACATCATCGACGACCACCAAGGAAAGAAGGTCAGCAATATTACCAATGGTGAAGCAGAGGAGGATATAGTTGATGTTCTTCTCAGGATTCAGAAGGAGAATAACCAAGAAGTCCCATTATCTATCAACAACATCAAAGCCGTCGTCCTGGACGTTTTTGTTGCTGGAACCGAGACATCAGCAACAACGATAGATTGGGCAATGTCAGAGTTGCTCAGAAACCCAGAGACGATGAAAGAGGCACAAGCAGAGGTAAGAAGGGTGTATGGAGGCAAAGGAAATGTAGATGAGTCAGAACTTCACCAGTTGAAATATGTAAATGCTGTTATCAAAGAAACCTTGAGGCTACACCCACCTGGGTCATTGCTAGTTCCAAGAGAAAATAGCGACACTTGCGAAATCAATGGTTACACGATACCTGGTAACACTAAGGTCTTGATTAACGCTTGGGCAATTGGAAGGGATCCCAAGTATTGGAATGAACCAGAGAAATTTGAACCAGAGAGGTTTCTAAACGATCCAATTGATTACAAAGACTCAAGCTTTAAGTATATCCCATTTGGTTTTGGAAGGAGGATATGCCCAGGAATCACATTTGCCACACCAGTCTTAGAACTGCTACTTGCCAATTTGCTTTACCATTTTGATTGGAAGCTTCCTAATGGGAAAAGAAATCATGAAGTGGACATGAGTGAAGCATTTGGTGCCACAGTAAGAAGAAAAAATGATCTATGCCTAGTTCCGATTCGCTATAACCCTTAG 1500 0.4387 MEIQIPYSIIFTFFCIFLVIYRLSSSKKRIKNLPPGPPKLPIIGNLHQLAGPLPHRILRDLANKYGPLMYLKLGETSNVVVTSPEVVKEITKTHDQIFANRPRILVSEVFCYNSTDLVFSPYGSYWRQLRKICTLELLSAKRVQSFRKIREEEVSALVQNISELEGSIVNLSKKISPLTNSIVARAAFGKKTKNVEEILSTLEYTIELASGFAVSDLYPSLKFLTVISGTKAKVAKAHRDVDRLLGNIIDDHQGKKVSNITNGEAEEDIVDVLLRIQKENNQEVPLSINNIKAVVLDVFVAGTETSATTIDWAMSELLRNPETMKEAQAEVRRVYGGKGNVDESELHQLKYVNAVIKETLRLHPPGSLLVPRENSDTCEINGYTIPGNTKVLINAWAIGRDPKYWNEPEKFEPERFLNDPIDYKDSSFKYIPFGFGRRICPGITFATPVLELLLANLLYHFDWKLPNGKRNHEVDMSEAFGATVRRKNDLCLVPIRYNP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0088 499 CDD CYP71-like 64 490 - -
Dere08g0088 499 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 SUPERFAMILY Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 Gene3D Cytochrome P450 18 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PANTHER CYTOCHROME P450 71B11-RELATED 17 495 - -
Dere08g0088 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Dere08g0088 499 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere08g0088 499 Coils Coil 154 174 - -
Dere08g0088 499 FunFam Cytochrome P450 71D8 26 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0088 Dere-ChrDere08 2159995 2161618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0088 8 497 Cytochrome P450 AT3G26300 42.231 7.43e-138 405