Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0046 ATGAAGCTCCACTATCTTTCTCTGTTTCTGGTTTTGGTCACTACTTCAAGTCTTGAAGCACAAGCAAATGTGCCCAGGAAATCAGTAAATTCTGTACCACCTGAAGCCTTGCTTTCCACTGATCACTATCATAGAACATGTCCAGATGCTGAAGGCATTATCAACCAAAAGGTCACTGCTTGGGTTAAGAGGGATCCCACCTTGGCTCCTGCCATCATCCGCTTGCATTTCCATGATTGTGCTATTAGAGGATGCGATGCATCAATTCTGCTCAACTATCCAACTAGTGAGAGGGCAGCTTATGAGAGCAGAACCCTGAGAGGCTTCCAAGTGATAGATGACATCAAGGCAGAGCTAGAGAAGAGGTGCCCCAAAACTGTCTCTTGTGCAGACATTCTCACAGCTGCTGCAAGAGATGCCACCATTGTAGCTGGAGGGCCATTCTGGGAAGTCCCATTTGGCCGGCAAGACGGCAGAGTTTCCATAGCCAGCGAAGCCAGATTGGTCCCTCATGGCCACGAAAACATCACAGCTCTTCTTGAATTCTTCCAAGAACTAGGCCTAGACATGCTTGATTTGGTCACTCTCTCAGGTTCACACACTATTGGGAGGAGCTCCTGCAGTTCTTTCATGGATAGGCTTTATAATTTCAATGGGACTGGAAAACCTGACCCGTCACTCAACATATATTACTTGAAGTTGCTGAGGAGAAGATGCAAAAGGGAGATGGATTTGGTGCACCTAGATGTTATAACTCCTAGGACTTTTGACAATATTTATTACACAAATCTCAAGAGGAAGGTGGGTTTGTTGTCTACAGATCAGTCACTGTTTTCAGATGCAAGGACTGGTCCTTTTGTGGAAGCATTTGCGACTCAACCTTTCCTCTTCACTAGCCAGTTTGCAGTGTCAATGGTGAAGCTTGGGAATGTTCATGTGTTAACAAGGGCAAATGAAGGTGAAATCCGAGCCAACTGCAACTCTCGCATTTTCTATCAACATGGATGCATATCCAAAATACAAAGAGATAAAGGCAAAGCAATAACCAAAAAGACAAGAGGAGGAAACAGATCGTTCAATTCAAAGAGAACAAAATATCACTAA 1104 0.4438 MKLHYLSLFLVLVTTSSLEAQANVPRKSVNSVPPEALLSTDHYHRTCPDAEGIINQKVTAWVKRDPTLAPAIIRLHFHDCAIRGCDASILLNYPTSERAAYESRTLRGFQVIDDIKAELEKRCPKTVSCADILTAAARDATIVAGGPFWEVPFGRQDGRVSIASEARLVPHGHENITALLEFFQELGLDMLDLVTLSGSHTIGRSSCSSFMDRLYNFNGTGKPDPSLNIYYLKLLRRRCKREMDLVHLDVITPRTFDNIYYTNLKRKVGLLSTDQSLFSDARTGPFVEAFATQPFLFTSQFAVSMVKLGNVHVLTRANEGEIRANCNSRIFYQHGCISKIQRDKGKAITKKTRGGNRSFNSKRTKYH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0046 367 FunFam Peroxidase 170 308 - -
Dere08g0046 367 Gene3D Peroxidase, domain 2 170 308 - -
Dere08g0046 367 ProSiteProfiles Plant heme peroxidase family profile. 37 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PANTHER PEROXIDASE 25-RELATED 14 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Dere08g0046 367 CDD secretory_peroxidase 38 327 IPR033905 GO:0004601|GO:0042744
Dere08g0046 367 SUPERFAMILY Heme-dependent peroxidases 38 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 Gene3D - 41 327 - -
Dere08g0046 367 MobiDBLite consensus disorder prediction 347 367 - -
Dere08g0046 367 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Dere08g0046 367 FunFam Peroxidase 41 180 - -
Dere08g0046 367 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere08g0046 367 Pfam Peroxidase 55 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0046 Dere-ChrDere08 1412763 1415628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0046 33 331 Peroxidase AT1G30870 52.961 1.88e-112 330