Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0042 ATGCCCCTATTTCTCTCCGATGAGGAGTTCTCTCGGTGCTCCAACGACGCCGCTGCGGTGGCCGAGAAGGCCGACGCATTCATCCGCAGCCTTCTCAACGAGCTTGAGACTGTCAAGGCCAAGGCTGATGCTTCTGACATCAACGCGGAGCAGAACTGTTCTCTCATAGAGCAGAAGTACCTCTCTCTCACTGCTGAATTCTCAAAGCTCGAGTCACAAGTTGCCGAGCTCCAATCAACCCTTGATCAACGCCTCGCCGAGCTCTCCGAAATTCAAACTCAGAAGCAGCAAATTCATTTGCAATCTGTTGAGAAAGACCGGGAGATAGAGAGGTTGAGGACGGAGGTGGGTGAACTGCATAAGTCAAAAAGGCAGTTAATTGAGTTGAATGAGCAAAAGGACTTGGAGCTTAGTGAGAAGAATGCTGCCATCAAGAGCTATCTTGATAAGATTTTAACCCTTAACAATGCTGTCATGCTTGGTGTCTTCCTGTTGTCGATGATCGTGAAGGTCAACTTGTCTGAAAATGCTGCTCTAAAGGAAGCCCGTTTGAGTGAAGTTGAGGCAGAGTTGGTGCGATCTCGCGCTGAATGTACTCGCCTTTCACAGGAGAAAGAGATAATTGAGAGACAGAATGCTTGGCTTAATGATGAGCTGACCACTAAGGTTAACAGTTCCTTTGAGCTGCGCCGTAAACATTCTGAGTTGGAGGCTGAAATGTCTTCTAAGCTTGCAGATGTAGAGAGGCAATTCAGTGAATGTTCTAAATCTTTACAGTGGAACAAGGATAGAGTGAGGGAGTTAGAAATGAAGCTTAAATCTACACATGAGGAATTAATTTCTGCTAAAGATGCTGCTGCAGCTAATGAAGCGCAATTGTATACTGAGCTCTCAACTCTTAATAAGCTTAATGGGCTATATAAAGAAAGTTCTGAGGAATGGTCTAGAAAGGCAGCAGACCTTGAGGGTGTGATCAAGGCGATGGAGTCACATCAGAAGCAAGTTGAAGATGATTATAAAGAGAGATTTGAGAAGGAATCTTCTGCAAGAAAACAGTGTGAAAAGGAGGTTGCTGATTTGAAAGCAAAGCTTGAGACATGTGAAGCTGAAGTTGAGAGAAGTAAGAAAAATGAGCTGAATATTCTTCCACTCAGCAGTTTCAACCCTGAACCGTGGTTGGTATCAAATGAAACCAATGACTTGGTTGAGCAAAATCAATTGCTTGTCCCAAAAATTCCTGCTGGTGTTTCTGGAACTGCATTAGCTGCTTCACTCCTGCGTGATGGGTGGAGTTTGGCAAAAATGTATACAAAATACCAAGAGGCTGTCGATGCACTGCGGCATGAGCAGCTTGGTAGGAAGGAATCTGAGGCCGTTTTGCAAAGGGTTTTATATGAGTTAGAGGAGAAAGCAGAAGCAATTATAGATGAAAGAGCTGAACATGAAAAGATGGTTGAGGCATACTCTTTGATGAACCAAAAATTGCAGAACTCTTTTACCGAGAAGGCAAGCTTAGAGAAATCTATCCAGGAACTGAAGGCTGACCTCAGAAGGCATGAACGGGATTATAATCTAGCTCAAAAAGAGATTTTTGACCTTCAGAAACAGGTGACAGTTCTCTTGAAGGAATGCCGAGATATACAACTTCGTTGTGGATCAATTGGGCTTGACAGTGTTGATGATGCTGCAAATAGTCTTTCATCAACGCTTACAGAGACTGAAGCTGAAAAAGTTATCTCAGAGCACCTTTTGACCTTCAAGGACATCAATGGATTAGTTGAGCAGAATGTTCAACTTAGAAGCCTTGTGAGAAGTCTCTCTGACCAGATAGAAAATAAGGAGATGGAATTCAAGGAGAGGCTTGAAATGGAGCGCAAGAAACATACTGAAGAAGCTGCTTCTAAAGTTACAGCTGTCCTGCAGAGAGCTGAAGAACAAGGACGCATGATTGAATCACTTCATGCATCTGTTGCAATGTACAAGAGATTATATGAGGAACATAGTCTTCATTCATCTCATTCAAATCCCTCTGAAGCTCCTGCAGGTGCTGCAGATGTAGGAAGAAACAACCTCAAGACTTTAATTGAAAGCTCACTGGAAGCTACTAAGAAGTCCCTTGAAAAGACTATGGGGCGTGTAAGGTGCCTTGAGGATGATCTAGCAAAGTCCAGGAGTGAGAATATTGTATTACGATCTGAACGTGACAAGTTGGTACTTGAAGCAAATTTTGCTAGGGAGAGGCTTGATGGCTTCATGAAAGAATTTGAACACCAGAGAGCTGAAACCAATGGCATTTTAGCAAGAAATGTGGAGTTTTCTCAACTAATTGTTGACTACCAACGAAAACTGCGTGAAAGTTCTGAGTCAATGAATGCTGCAGAGGAGCTCTCTCGGAAGCTGTCTATGGAGTTGTCTGTTTTGAAGAACGAAAAAGAAGTCTTATTAAATGCTGAAAAGAGAGCATCTGATGAGGTTCGCAGTTTATCTGAAAGGGTGCAGCGCCTGCAGGCTAGTTTGGGTACCATAGAGAGTGCAGAGAAAATCCGAGAGGAAGCAAGAGCTGCAGAGAGGAGTAAACAAGAGGAATATATAAAAAAATTGGAGAGGGAATGGGCTGAGGCCAAGAAAGAGTTACAAGATGAGCGGGAAAGTGTGCGGACACTCACACTAGACCGTGACCAGACCATAAAAAGTACTATGAGACAGGTTGAGGAGATGGGCAAAGAGTTAACTAACGCATTGCGTGCAGTTGCATCTGCTGAGTCCAGGGCTGCTGTTGCAGAGGCAAAACTATCCAGTCTTCAAAGAAAAAGGGGTTCCACGGATGATAAGAATGTCGAAATGGTTGGAGTGAGTGGACCTGGCACTTTGTCCAATGACGAGGTTGTTGCCGAATTGAATGATGCAAAGCAGGAGATTGAAAAATTGAAAGAGGAAGCACAGGCTAATAAATCTCACATGCTGCAGTATAAGAGCATTGCTGAGGTGAATGAAGATGCTCTGAAGCAGATAGAAATTGCACATGAAAGCTTTAAGATTGAGGCTGACAATGCAAAGAAAGCACTAGAAGCTGAACTTGGTTCACTTAGAGAGAAGGTTTCAGAGCTTGAAAATGAATCTAGTTTGAAATCTGAAGAAGTGGCATCTGCAGCTGCGGGAAAGGAAGAGGCTCTGACATCTGCAATGACTGAGATCAGACATCTAAAAGAAGAAATTTTAGTGAAATCTTCGGAAATTTCAGCAATGGAAGTTCAGATCTCTGGTTTAAAAGAGGACCTAGACAAGGAACATCATAGATGGCGTGCAGCTCAATCCAATTATGAAAGACAGGTCATCCTTCAATCTGAGACAATTCAAGAGTTGACAAAAACATCAGAAGCTCTAGCCGTGCTGCAAGAGGAGGTTTCAGAGTTACGAAAACTGGCTGATGCTCAGAAAATTGAAAATAACGAATTAAAGGCCAAGTGGGGAGAGGAGAAGGCAGTTCTAGAGAAGTCTAAGATTGATTCTGAGAAGAAATACAGTGAAATTAATGAGCAGAATAAAATATTACATAGCCGGCTTGAAGCTTTGCATATTCAATGGGCTGAGAAGGAACGTAATTCTGCTGGTATTTCCTCTGAAAGTAGTAGTGGTGATACAATTGGAGATGCTGGTCTTCAAAATGTGATTAATTATCTTAGAAGATCGAAAGATATTGCAGAAACAGAAATCTCGTTGTTAAAACAGGAAAAGCTGCGGTTACAGTCACAGCTTGAGAGTGCTCTCAAGGCAGCAGACTCTGCACATGCATCGCTAGAAGGTGAGCGTGCAAAATCAAAATCGTTGCTGTTCACTGAAGATGAGTTTAAATCATTGCAGCTACAGGTTAGGGAAATGAACTTACTTCGTGAGAGCAATATGCAGCTCAGGGAAGAAAATAAGCACAATTTTGAAGAGTGCCAGAAATTGCGTGAAATTGCGCAAAAGGCTAGAGCTGAGACAGAGAATTTAGAGAATCTTCTGAGGGAGAAGGAGACTAATCTGGATGGTTGTAAGCTTGAAATTGAAACACTTCGGATGGAAAAGGACAATCTGGATCACAAGGTTTCTGAGTTGCTCGAAAGGTGTAAAAATATTGATGTGGAAGAGTATGATCGAATGAAGAATAGTGTTAGAGATATTCAGGATAAACTAAACGAGAAGGATGCTCAGGCAGAGGAAATTGGGAAAATTCTCTTGGAAAAACAGGATTTAATCTCACACTTCGAGCAAGATCTTTCAAAGTGCAGAACTGAGCTGGAAGAGAGAGAAAAGAGGATAAATGATATTTTACAAGTTGAGGCTACCTTAAGGCTGGATGTGGAAAGGCATAGGAAAATGCTGACTCAGTTTAAGAAGAGGATGGATAGTTTGTCTAGGGAAAAGGAGGACCTAGGGAAAGAAAATCAACAACTTTCTAAGCAGCTAGAAGAAATCAAGCAAGGGAAAAGGTCCACTAGTGATGCTACGGGTGAGCAGGCCATGAAGGAGGAAAAGGACACCAGAATACAGACTTTGGAGAAACTTCTGGAGAGACAGAGAGAAGAATTAAAGAAGGAGAAGGAAGACAATCGTATGGAGAAAGGCAGACGGCTGAAGACTGAAAAGGCTATAAAGGACTCCTACGGCAACGTTGAACAGGAGAAAACGAAGTTTATTGGTGAACTTGAGAGGCATAAAGAGGTGGTGAAACGGTTATCAGATGAAATTGAGAAGCTTAGGCTTGTCATAGGCAATCTTCCCGAGGGAACCAATGTGGCTCAATTACTATGTGGGTCCAACATGGACGAGCTTGCTGCTCCTTATATATCAGCTGTTGAAAATTTTGAAAAGGAAGCTCAGTCAGTATTGTCTGAGCTTGAAGGTCGTGGTAATTCTGGAGATGCAACTTCAATTGCAGATACTTCAGCCACTGCTGCAGGTCCTCTGGTCCCCGTTCAATCCCCTGGTCTTGTATCCACAGTTGTTCCTGGAGCGAGCAGTCTACCACCTAAAGCAACTGAAGAAAGTAAGAAAAGCCTTTTGCCAAAAGCTAATGTCGAAACTCGTAAAACAGGGAGGAGATTGGTCAGGCCTCGGCTTATAAAACCGGAAGAGCCTCAAGGTGATAGAGAAATGTCTGAGGCCGATGGACCTCAAATTGGAAGCAAGCCTGGGCCTTCTAGTGACACAGACACTCAAAGCAATCTTGCTCTATTATCCCAACAAGTGGCTCGTAAACGTGTTGCTTCTACCTCCACTTCTGAGTTACATGATGAATCAGTTGCACCTGGTGAGAACAACTCAGATGTAGTTGCACTTTCTGTGAAGAAATCAAAGGGTTCTGATTCCCCACAGGAAAGTGCTGAAGGACAAGCAGCTGCAACTCCAGAACTTACTGGTGGTCAACCAATCGCCGAAGAATCATTTGATGGTGGTGAGTTTCTTCAAGGTCAAAATGAGGAAGTGATGGATGCTCAGAATGAAGAAGGTGAGGTTATTGTTGAGAAAGGTGAGTCCAAAGATCCAATGAATGATGGTATGATTCAAGAGGAATCACAAGGGGACAAAAACAGCATTTTAGAAGAGAATGTGGATCGAACAGTTGAGATGAAGGTGATTTCTGATGATATGCAGAAAGATCAGGGGGAGCCAGACAACCAGCTTTCAACAATGGAACATGGGAGTGAGAAAGAAGAGGGAGAATTGTTGCCAGAGGCTGCTGATCTTGAGGGTGGTAATGATACATCTAACCTCCTGGAAAACCAAGAAATTCGGGAAGGTCATTCCGAGCCTGCTGCAACCCCCGAACCTTCCCAGACTATGGTTGATGATGAAGCACTAGAGGCAGGCGAAATCAACTCCCCTGAGCTTTCAACTGATGACAAGAATGATGGAGACACGGTTGAGGAGGCTGCTGATGCTTCTGATAAGTCAAATGATGCTAACGACCCGATTGCAGTTGAGACTGATCAGGTGGTTGTGCCTGCACCTGTTACAACTGAGAGCACTTCAACTAGCAATGCTCCAGAAACTGGATCCTCGAAAATCATCCCTGTTCCAAAACAGGGCACGAGTGTTGCCTCAGAAGCTGAAGAGACAAAACAGGTTTCACCCATTCGTAGTACCTCAACTGTCCCAAAACAAGGCACGATTGTTGCCTCAGAAGCCGAAGAGACAAAACAGGTTTCGCCGGTTAGTAGTACTTCAACAACCATAAATTTATCAGAGCGAGCTAGGGAGAGGGCTCAAATGAGACAGGCTGGGGTGGTTTCTTCGATAGGAAGAGGCCGTGGAAGAGGAGCTCCCCGTGGTAGAGCTGCCCGAGGTGGAGGCGGACGTGTTGGTGGGCGTAGGCAACCCCCTACTGATGCTTAA 6378 0.4374 MPLFLSDEEFSRCSNDAAAVAEKADAFIRSLLNELETVKAKADASDINAEQNCSLIEQKYLSLTAEFSKLESQVAELQSTLDQRLAELSEIQTQKQQIHLQSVEKDREIERLRTEVGELHKSKRQLIELNEQKDLELSEKNAAIKSYLDKILTLNNAVMLGVFLLSMIVKVNLSENAALKEARLSEVEAELVRSRAECTRLSQEKEIIERQNAWLNDELTTKVNSSFELRRKHSELEAEMSSKLADVERQFSECSKSLQWNKDRVRELEMKLKSTHEELISAKDAAAANEAQLYTELSTLNKLNGLYKESSEEWSRKAADLEGVIKAMESHQKQVEDDYKERFEKESSARKQCEKEVADLKAKLETCEAEVERSKKNELNILPLSSFNPEPWLVSNETNDLVEQNQLLVPKIPAGVSGTALAASLLRDGWSLAKMYTKYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAEAIIDERAEHEKMVEAYSLMNQKLQNSFTEKASLEKSIQELKADLRRHERDYNLAQKEIFDLQKQVTVLLKECRDIQLRCGSIGLDSVDDAANSLSSTLTETEAEKVISEHLLTFKDINGLVEQNVQLRSLVRSLSDQIENKEMEFKERLEMERKKHTEEAASKVTAVLQRAEEQGRMIESLHASVAMYKRLYEEHSLHSSHSNPSEAPAGAADVGRNNLKTLIESSLEATKKSLEKTMGRVRCLEDDLAKSRSENIVLRSERDKLVLEANFARERLDGFMKEFEHQRAETNGILARNVEFSQLIVDYQRKLRESSESMNAAEELSRKLSMELSVLKNEKEVLLNAEKRASDEVRSLSERVQRLQASLGTIESAEKIREEARAAERSKQEEYIKKLEREWAEAKKELQDERESVRTLTLDRDQTIKSTMRQVEEMGKELTNALRAVASAESRAAVAEAKLSSLQRKRGSTDDKNVEMVGVSGPGTLSNDEVVAELNDAKQEIEKLKEEAQANKSHMLQYKSIAEVNEDALKQIEIAHESFKIEADNAKKALEAELGSLREKVSELENESSLKSEEVASAAAGKEEALTSAMTEIRHLKEEILVKSSEISAMEVQISGLKEDLDKEHHRWRAAQSNYERQVILQSETIQELTKTSEALAVLQEEVSELRKLADAQKIENNELKAKWGEEKAVLEKSKIDSEKKYSEINEQNKILHSRLEALHIQWAEKERNSAGISSESSSGDTIGDAGLQNVINYLRRSKDIAETEISLLKQEKLRLQSQLESALKAADSAHASLEGERAKSKSLLFTEDEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLREIAQKARAETENLENLLREKETNLDGCKLEIETLRMEKDNLDHKVSELLERCKNIDVEEYDRMKNSVRDIQDKLNEKDAQAEEIGKILLEKQDLISHFEQDLSKCRTELEEREKRINDILQVEATLRLDVERHRKMLTQFKKRMDSLSREKEDLGKENQQLSKQLEEIKQGKRSTSDATGEQAMKEEKDTRIQTLEKLLERQREELKKEKEDNRMEKGRRLKTEKAIKDSYGNVEQEKTKFIGELERHKEVVKRLSDEIEKLRLVIGNLPEGTNVAQLLCGSNMDELAAPYISAVENFEKEAQSVLSELEGRGNSGDATSIADTSATAAGPLVPVQSPGLVSTVVPGASSLPPKATEESKKSLLPKANVETRKTGRRLVRPRLIKPEEPQGDREMSEADGPQIGSKPGPSSDTDTQSNLALLSQQVARKRVASTSTSELHDESVAPGENNSDVVALSVKKSKGSDSPQESAEGQAAATPELTGGQPIAEESFDGGEFLQGQNEEVMDAQNEEGEVIVEKGESKDPMNDGMIQEESQGDKNSILEENVDRTVEMKVISDDMQKDQGEPDNQLSTMEHGSEKEEGELLPEAADLEGGNDTSNLLENQEIREGHSEPAATPEPSQTMVDDEALEAGEINSPELSTDDKNDGDTVEEAADASDKSNDANDPIAVETDQVVVPAPVTTESTSTSNAPETGSSKIIPVPKQGTSVASEAEETKQVSPIRSTSTVPKQGTIVASEAEETKQVSPVSSTSTTINLSERARERAQMRQAGVVSSIGRGRGRGAPRGRAARGGGGRVGGRRQPPTDA 2125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1891 1905 - -
Dere08g0042 2125 Pfam TPR/MLP1/MLP2-like protein 1064 1191 IPR012929 GO:0006606
Dere08g0042 2125 Coils Coil 596 616 - -
Dere08g0042 2125 Coils Coil 776 838 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1956 1978 - -
Dere08g0042 2125 Coils Coil 1413 1433 - -
Dere08g0042 2125 Coils Coil 1051 1071 - -
Dere08g0042 2125 Coils Coil 1121 1155 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1772 1793 - -
Dere08g0042 2125 Coils Coil 1314 1369 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1724 1762 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1677 1713 - -
Dere08g0042 2125 Coils Coil 1378 1398 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1464 1508 - -
Dere08g0042 2125 Coils Coil 1001 1046 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1662 1822 - -
Dere08g0042 2125 Coils Coil 495 536 - -
Dere08g0042 2125 Coils Coil 903 937 - -
Dere08g0042 2125 Coils Coil 464 484 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 936 958 - -
Dere08g0042 2125 Coils Coil 842 884 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1996 2078 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1856 1883 - -
Dere08g0042 2125 Coils Coil 60 94 - -
Dere08g0042 2125 Coils Coil 1503 1537 - -
Dere08g0042 2125 Coils Coil 626 646 - -
Dere08g0042 2125 Coils Coil 1563 1583 - -
Dere08g0042 2125 Coils Coil 706 726 - -
Dere08g0042 2125 Coils Coil 959 986 - -
Dere08g0042 2125 Coils Coil 1286 1306 - -
Dere08g0042 2125 Coils Coil 265 285 - -
Dere08g0042 2125 Coils Coil 170 218 - -
Dere08g0042 2125 Coils Coil 1448 1489 - -
Dere08g0042 2125 PANTHER NUCLEOPROTEIN TPR-RELATED 1 2113 - -
Dere08g0042 2125 Coils Coil 343 377 - -
Dere08g0042 2125 Coils Coil 1231 1258 - -
Dere08g0042 2125 MobiDBLite consensus disorder prediction 1838 2125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0042 Dere-ChrDere08 1351658 1384194 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0042 08 1351658 1384194 Dere08g0042 08 1351658 1384194 ECH