Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0036 ATGCTGAATTACTATAATGGAAACTGTATTGAAAGAGGTCAAGAGCGGAAACTGTTTTGTTGCCTAAAAGATTCTGATACTACTTTTGATCGGGCCACTGGAAATGCATGGTCATTGCCTACACAGGCAAAGACCACTAACAATTATGGCCAAGAGAGTGGCAATAGCTCTCGCAGTGATAGTTTAGAGAGCACTAGTACACCCACTAAGTCACATACTGGTGGTGACGTTTTATGCCACAGATACTCTGTTAGCTTTGGAGTACTTACACATGGTAGGCATCGTGTACAGAGAGACTTGAAGCCAGAGAATATCCTAGTCAGAGACGAAGGCCATATCATGCTCTTAGACTTTGATTTATCGCTTCGCTGCTCTGTTAGTCCAACACTTGTCAAGTCTTCATCTGCTAATGTAAGCAATAATGGTTCTGAATGCATTTTGGACACTAAGCATGCAATACAGGAATTGATGGTGGAGCCCACAAATGTGAGGTCTATGTCATTTGTAGGGACTCGTGAGTATCTTGCTCCTGAGATTATACGAGGAGAGGGACATGACAATGCAGTAGATTGGTGGACATTTGGGATCTTCTTGTATGAGCTCTGGCATGGCATAACTCCCTTCAAGGGTGCAATAAATTGTGCTACATGTAGATCAGCCATTGAAGTTCCCAGAAGCTCCCGATGTCAATTCTATGGCACTTGA 705 0.4312 MLNYYNGNCIERGQERKLFCCLKDSDTTFDRATGNAWSLPTQAKTTNNYGQESGNSSRSDSLESTSTPTKSHTGGDVLCHRYSVSFGVLTHGRHRVQRDLKPENILVRDEGHIMLLDFDLSLRCSVSPTLVKSSSANVSNNGSECILDTKHAIQELMVEPTNVRSMSFVGTREYLAPEIIRGEGHDNAVDWWTFGIFLYELWHGITPFKGAINCATCRSAIEVPRSSRCQFYGT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0036 234 MobiDBLite consensus disorder prediction 40 74 - -
Dere08g0036 234 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0036 234 Gene3D Transferase(Phosphotransferase) domain 1 88 231 - -
Dere08g0036 234 PANTHER FLIPPASE KINASE 1-RELATED 96 218 - -
Dere08g0036 234 SUPERFAMILY Protein kinase-like (PK-like) 91 213 IPR011009 -
Dere08g0036 234 MobiDBLite consensus disorder prediction 40 73 - -
Dere08g0036 234 Pfam Protein kinase domain 91 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0036 234 SMART serkin_6 4 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0036 Dere-ChrDere08 1316672 1323924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0036 96 227 AGC Kinase Gene Family AT1G79250 53.631 2.72e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere08g0036 Pkinase 8.6e-21 CL0016