Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2201 ATGAATAGTAGCAGTGCAAGTGGTGGAGGTGGGGGTGTTGGGGCTGCGACGGGGATGATGGGAATTTCTAGGTCACCTTTCACAGTGTCTCAGTATCAGGAACTGGAGCACCAAGCTTTGATTTTCAAGTACATGGTGGCGGGTCTTCCTGTGCCTTCTGATCTTGTGCTCCCCATTCAGAGGAGCTTCGAGTCCATTTCTCAAAGGTTCTTTCACCATCCCACCATGAGTTATTGTTCCTTTTATGGGAAGAAGGTGGACCCCGAGCCGGGACGATGCAGGAGGACTGACGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCAAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACATACCATGACACAGTCATCATCCACTGTGACATCACTGACTGTCACAAGTGGCACCAGCAGAACTGGAAACTTGCAGAACCTTTCCACAAATGCCTTGGGTAATCCCCAAGGCACTGGTTCTGGAACATACCAACCCCAGTACCATCTTGATTCCATTCCCTATGGGATCCCAAGTAGAGAATACAGGTATCTTCAAGGGCTTAAATCTGAGGGTGGTGAGCATAGTTTCTTTTCTGAGGCTTCGGGAAGTAACAGGGTTCTCAGGATGGAATCACCATTGGAAAACACATGGCCTTTGATGCCAACCAAAGTTGCCTCAATTGCTACATCAAAATCAAGCAGCAACTCCATACTGCAGGGTGACTATTCTCAGCACTCATTTCTATCTAGTGAATATGCCTCTGGGGAACCTGCGAAGCTGGAGGGCAGCCAGGCTCTTCGACCTTTATTTGATGAATGGCCTAGAAGCAGGGAGTCATGGACTGGTCTGGAGGATGAGAGATCCAAGCAGGCAGCTTTCTCCACAACACAACTCTCAATATCAATCCCTATGTCATCTTCTGACTTCTCTGCAACGAGCTCTCAATCCCCAAATGGTGAGATTTAA 1002 0.489 MNSSSASGGGGGVGAATGMMGISRSPFTVSQYQELEHQALIFKYMVAGLPVPSDLVLPIQRSFESISQRFFHHPTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESHTMTQSSSTVTSLTVTSGTSRTGNLQNLSTNALGNPQGTGSGTYQPQYHLDSIPYGIPSREYRYLQGLKSEGGEHSFFSEASGSNRVLRMESPLENTWPLMPTKVASIATSKSSSNSILQGDYSQHSFLSSEYASGEPAKLEGSQALRPLFDEWPRSRESWTGLEDERSKQAAFSTTQLSISIPMSSSDFSATSSQSPNGEI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2201 333 ProSiteProfiles WRC domain profile. 87 131 IPR014977 -
Dere07g2201 333 ProSiteProfiles QLQ domain profile. 26 61 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere07g2201 333 MobiDBLite consensus disorder prediction 290 311 - -
Dere07g2201 333 Pfam QLQ 26 60 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere07g2201 333 MobiDBLite consensus disorder prediction 119 174 - -
Dere07g2201 333 PANTHER GROWTH-REGULATING FACTOR 5 18 320 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere07g2201 333 SMART QLQ_2 25 61 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere07g2201 333 MobiDBLite consensus disorder prediction 130 174 - -
Dere07g2201 333 Pfam WRC 88 130 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2201 Dere-ChrDere07 38519562 38523626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2201 22 130 GRF Transcription Factor Family AT3G13960 61.062 1.98e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere07g2201 WRC 1.8e-21 No_clan