Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2199 ATGACTCAGAGCGCTGATATGATACGTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGTATGCATTTTAACCGAGCTTGCACAGGGTCAAAGGCTGAGTTCTCTGATGAAAACTGTCGTTTAGTGGGGACTAATCAGTATTCTATGGATGAGGGTGATGTTTCTTCTGTTAGGAGCAGGGCTCGTGAAAGCATCCAGCGTGCTGTAAGTGAAGCTAGTAACATGCTCAGTGTTAATTCCAGTCATGATTCCATATCTGAAAATGCTGATAGTAAACAGACTGTATCAAATAAGTATCTTGAAGGTTTTGATGATAACACTTCTTGTATTAGTAGAGCCAGTGATGCTAGTTTAGTGAATGGTAGCCATCCCAAGAATGCAGACAGAACAAATATATCTAGTAGTTCAGCTTCAGTTAGTCTCTTAGAGGCAGAAGGACCTGGAAGTGCACCATCTTTTGACATCTATGGCTTGCCTGAGATTCCCTCTTCTAAAGATGCGGATACTGGCAATAGCTCACTTAAGGTACAAAGCCAAGATTCACTGTCTCAAAGTGGTAAATCTCATTCAACTATTCCAAGGTCAATGGATGCGGATAGGGATACTTGTTCTCATAACCCTGAAAAATCTGAATGGTTAACGGAAAATATTGATTCATCATTGACTAAAGAGATAGCACCTTCAGTTCTATCTGGTGAGAAGTCTCTAGCAGATTCCGTAAAAATATTTCCCAAGTCAGAAGCAGATACTGTCATTGAAGTTGGGGATGCCCGGGATGAAGCTCCTAAAGTTGCAGTCCAAGATGTGCAGGATAAGACTGAACAGCTGCTTGAATCACCTGGCGTAGAGGAGCCACGATCCGAAGATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAAGTGTGTGATATCTGTGGAGATGCTGGTCGGGAGGATCTGCTTGCCATATGTAGTAGGTGTAGTGATGGTGCAGAGCACACTTACTGCATGCGAGAAATGCTTCAAAAGGTCCCTGAAGGAGACTGGCTGTGTGAAGAATGCAAATATGCAGAGGAGACAGAAAGTCAGAGGCTAGATGAAGAGAGAAAAGTCCCCAAAATTAGTTCAACTTCTCAACATTCTGGCAAGAGGCTTTCTGAAAATGTAGAACTAGCTCCAGTAGCAAAAAGGCAGACTCTTGAATCAAGCACAGGATCACCTAAGTCATCAAGCCCCAAGAGAATTGTTGCACTTTCTCAAGAATCTTCATTGAAGAGCTTAGATAAAGGTAAGGTGAAACCTGATAATCAGATGCCTATTCGTAATCACCCTGGTGGTGATAACATGGAAAGTGCTCGTTCTCCTCCTTCTGGTCCTCGGGGTCTACTTCAAAAGGGTATGCTGTTGAAGTCTAATTCATTCAACACTTTAAATTCAAAGCCGAGAGTCAAACTTGTGGATGAAGTTGTTCCCCAAAAGCTGAAAGGGCCAGGAGAAAATTCTTCCAAGAATATGGAAACACCTGCCCGGATGATAGGCAAATCCATGTCATTTAAATCCACAAATTTGGGTCGTTCGAGTGCTACTGCATCAAAAGTTAAATTGCTTTCTTCTAAATCTATACCTGCTCAGGATTTGAAAGGAACAAGGCATGCAAAAGATTGGGGTGCATATGACAGGAAAAGTCTCCCTAGGGTTGATCGATCAGTGGTTTGCTCAACAATGGCTACTTCTATTGTTTCAACAGCCAAAGGTGATCAGAAGCATACAACTCTTATTGAAGCCAGTAAGCCTTCACCAGTTAGCAACAACCGCGACTTAAAGATGAACCAAGATGGAAAATTAAGTACCTTATCAAAGTCTGTTAATAGTGTAGGCCGTAAAGGAGTAGAACCTCAAGTTAGTTCAGGAAAAATATATACCAGTGGTGATGAAACTGTACAAGACATGCAGCCTCGATTACGAGAAACAGCAATTCTGGTTGAGAAAACCAGAGATAGCTCTTCTGATCGTGTGAGGGTGGCAGATGTCATTCCTGCATCAAAAGACTTATTATGTCTGAAGTGTAAGGAATCTGGTCATACTACAGAATGTTGCACAATTGGTAAGAACCAGGAATCTGGTAATGAGTTATCTGCCAGTGCCACATGTACTTTGATAGAGGAGATGCATAAAAGTAATAGCGTGAAAGCTGCACTCCAAGCAGCTTTGCTTAGAATGCCTGAAATATACAAAAAGAAAGAAGTATCTAATCAAATGGATGAGCTTTCTCCATCTGGCACAGACTTGAAATGTGAAGTCAGTTCACAAGAACAAGTGTTGGTTTCTAGCACGACAAAGAATAGTATATCTGCTGAAGAAGGCTTTGAGGGGCAGGACATTCTTGAGACCTCTACAATTGCAACTTCCAAATGTTCATCTGATGAGAAGCAGCTCAGCTTATGCCGAATTGATTCTTGTTCTCAATTAGGAAACTCAGATTATAGTGGTCCTTTCACTGGAAAGCCTGCTACAAGAGACTTACAAAATCAAACTTTGACAATCTCACATGTCCTTTCAAAGATGGCCATTCCAGAATATGAATACGTCTGGCAGTATGAAATACTTTCCCCTGAGCTAGTTTGTCTTCTATTTCTGGATTGTTTTTACTGTGTTACTGTTTATGTATTGCTGTCAAGTTCTACATGTGATTTGTTGTTGGCATGCAGGGGTATCTTTGAGCTTCAAAGAAATGGAAAACCTCCTGACTTATGTGCTGGTATCCAAGCACATTTGTCAAGTTGTGCTTCATCTAAGGTTCTTGAAGTGGTGAACAAATTACCATCCAAAATTTCCCTCAATGAAGTTCCTCGCTCAAGCACATGGCCTTCACAGTTTCATCAAGGTGGCGCTAAAGAAAATAATATCGCACTTTACTTCTTTGCCAAAGATATTGAAAGTCATGAGAGACACTACAGGGGTCTATTGGATCACATGATGAGGAATGATTTAGCACTTAAAGGAATCTTTGACGGTGTTGAACTTCTCATATTCCCATCCAATCAGCTTCCTGAAAAATCACAGCGTTGGAATATGTTGTTTTTCTTGTGGGGTGTATTTAGGGGGAGAAGGACAAGTCATTCAGATTCTGCAAAAAAGATTTATATTCCGAGCATGAATATGATGCCAGTTAAAAAGGATTTTCCCACTGCTGTTATGACTTTGTCTGAGACCCATTGTTCACCAAAGCGAATGGATGACGAATCAATTGCTGGTGATAGTACATGTAGCATGGCTATCCCATCTACTTCCCTAGACGAAGGTCATGCTACAGCAAGTAGGAATTTTGATGTCAAAGAAACTAATCTTGACGAGACACATTTAGGCTCACAAGTAAACTTAGAGGAGCAAGATAGTAAATTTGACACCAAACCTACATTAAGGATTCCAGCTAGTGTTGCGCAGCCCTGTCAAGAGTTGAATTCTACTGGTTCGTCTCTGAAAGGTAGTCTCCTTGGACATGGACCAGACAAAGAGTCTGAACCCTCTCCTAGAGCACTGGGAACATGTGTAACTAGTAGGATTGTGGAAACAGAAGTTGATCCTAATATTTCTGTTAAGCAAGAGAAGTCTTTGTCTTCGGGAATTCCTTCTCTTGGCTCTCAAGAGATTGGAGCTGTAAGAATTACCAGTGAGGACAAATTTTCAGAGAGAATGATGAATGATAGTGATCAACAAAAGATTAATAGAAAACATAAAGGAGATGATTGGTACATTGATTTTAAGACAGCTTTTCAGGGAGACCTGAATGTAGAAGGGGTCAACTGTGAGCAGCCTGATGATAAAAGGTTTCAGCATATAGATCTTCTGGACACGGTTATGCAGGCTTCTGCAGTTACACGCAAGCGGCTTTGGGGTGAGACAGAAGTCAAATTGGAAGATGGAGAAAATTATACCAAGAAGTTGAAAACAGGTCTCAGTGGAGATTATGGATGTAGCAGTTCTGGAGGTAGAGACACTTTTAGGAACAGTTTGGCATCATGCGCAAATGATCTAGGTTCAGGTTCTTCAACTGAGGAGAAAGGATGTGAAGAAGCTTGTGATGAGAAAATCATCCGGGAAGACTTGGGAACAATGGAAAGAACTTTCTTTCCTGTTGATATACATAATAAAAATGACTCTCCTTTGGTTTCAAATAGCTTGTCACTAAAAGGGCCTCATGAGTATGATGACCAGTTTCATGATGAGATACCAAATTTAGAACTTGCTTTAGGGGGTGAAATGAAACCACCGCACAAGGGAATGCTGCCTTTCTTTGTTGGGGATGTAGACAAGAAAAATAGTCAGGAAAAGCCTCCAGATTGCTTGTCTGATGATCAAGAGGACGATGGTGTTGCTGCATCCCTCTCCCTTTCTTTATCATTTCCATCTTCAAACAAAGAACGCGTTAAAACTGTTTCTAAAGCAGAGCAGCTTTTGCCTGATGGGCATGTGAATACTTCGTTGCTCCTTTTTGGGAGATTTGCGGACAAGTAA 4512 0.4113 MTQSADMIRESGTCNVCSAPCSSCMHFNRACTGSKAEFSDENCRLVGTNQYSMDEGDVSSVRSRARESIQRAVSEASNMLSVNSSHDSISENADSKQTVSNKYLEGFDDNTSCISRASDASLVNGSHPKNADRTNISSSSASVSLLEAEGPGSAPSFDIYGLPEIPSSKDADTGNSSLKVQSQDSLSQSGKSHSTIPRSMDADRDTCSHNPEKSEWLTENIDSSLTKEIAPSVLSGEKSLADSVKIFPKSEADTVIEVGDARDEAPKVAVQDVQDKTEQLLESPGVEEPRSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGDWLCEECKYAEETESQRLDEERKVPKISSTSQHSGKRLSENVELAPVAKRQTLESSTGSPKSSSPKRIVALSQESSLKSLDKGKVKPDNQMPIRNHPGGDNMESARSPPSGPRGLLQKGMLLKSNSFNTLNSKPRVKLVDEVVPQKLKGPGENSSKNMETPARMIGKSMSFKSTNLGRSSATASKVKLLSSKSIPAQDLKGTRHAKDWGAYDRKSLPRVDRSVVCSTMATSIVSTAKGDQKHTTLIEASKPSPVSNNRDLKMNQDGKLSTLSKSVNSVGRKGVEPQVSSGKIYTSGDETVQDMQPRLRETAILVEKTRDSSSDRVRVADVIPASKDLLCLKCKESGHTTECCTIGKNQESGNELSASATCTLIEEMHKSNSVKAALQAALLRMPEIYKKKEVSNQMDELSPSGTDLKCEVSSQEQVLVSSTTKNSISAEEGFEGQDILETSTIATSKCSSDEKQLSLCRIDSCSQLGNSDYSGPFTGKPATRDLQNQTLTISHVLSKMAIPEYEYVWQYEILSPELVCLLFLDCFYCVTVYVLLSSSTCDLLLACRGIFELQRNGKPPDLCAGIQAHLSSCASSKVLEVVNKLPSKISLNEVPRSSTWPSQFHQGGAKENNIALYFFAKDIESHERHYRGLLDHMMRNDLALKGIFDGVELLIFPSNQLPEKSQRWNMLFFLWGVFRGRRTSHSDSAKKIYIPSMNMMPVKKDFPTAVMTLSETHCSPKRMDDESIAGDSTCSMAIPSTSLDEGHATASRNFDVKETNLDETHLGSQVNLEEQDSKFDTKPTLRIPASVAQPCQELNSTGSSLKGSLLGHGPDKESEPSPRALGTCVTSRIVETEVDPNISVKQEKSLSSGIPSLGSQEIGAVRITSEDKFSERMMNDSDQQKINRKHKGDDWYIDFKTAFQGDLNVEGVNCEQPDDKRFQHIDLLDTVMQASAVTRKRLWGETEVKLEDGENYTKKLKTGLSGDYGCSSSGGRDTFRNSLASCANDLGSGSSTEEKGCEEACDEKIIREDLGTMERTFFPVDIHNKNDSPLVSNSLSLKGPHEYDDQFHDEIPNLELALGGEMKPPHKGMLPFFVGDVDKKNSQEKPPDCLSDDQEDDGVAASLSLSLSFPSSNKERVKTVSKAEQLLPDGHVNTSLLLFGRFADK 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2199 1503 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 260 369 IPR013083 -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 1147 1161 - -
Dere07g2199 1503 ProSiteProfiles Zinc finger PHD-type profile. 305 356 IPR019787 -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 360 463 - -
Dere07g2199 1503 SUPERFAMILY FYVE/PHD zinc finger 294 357 IPR011011 -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 197 216 - -
Dere07g2199 1503 PANTHER - 305 1068 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 1435 1454 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 169 196 - -
Dere07g2199 1503 SMART PHD_3 307 354 IPR001965 -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 396 424 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 1139 1178 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 157 219 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 266 299 - -
Dere07g2199 1503 MobiDBLite consensus disorder prediction 619 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2199 Dere-ChrDere07 38473211 38480681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2199 304 369 C2H2 Transcription Factor Family AT3G01460 36.620 1.12e-06 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g2199 07 38473211 38480681 Dere07g2199 07 38473211 38480681 ECH