Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2196 ATGGGATTAGAGTGGAATTTCCACATCCAAAAGGGATTTCCCTTGATGCTGATACTTTGGTTTGGTGTCATCCAAGTAAGTTCGATTAATGAAGAGGGTTCGATACTTTTGGACTTTAAAGGTTATCTTTCTGACCCAGAAAACAATCTCCATAACTGGAATCCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTATTGCAATGATTCAACGGTAACTTCTGTAAATCTTTATCACCTTAATCTTTCTGGTTCTTTATCTCCAGTCATCTGCAAACTTCCTCATCTTGTTGAGTTAAATGTGTCAAAGAATTTCATTTCTGGCCGCATTCCTGATGATTTTGCTCTTTGTAGCAGTTTAGAAATATTAGACCTTTGTACAAATAAGTTTCATGGAGAATTTCGGACCCCTATGTGCAAAATCGCCACACTTAGAAACCTTTATCTGTGTGAAAATTTTATGTATGGTGAAGTGCCAAAAGAAATTGGGAATTTAACTTCCCTTGAAGAGCTAGTCATTTATAGCAATAATTTAACTGGAAGAATTCCCGCGTCAATAGGTAAACTGAAGCGGCTAAAAATCATCAGGGCAGGATTGAATAGCCTCACAGGTCCAATACCTGCTGAAATTAGTGAGTGTGAGAGCTTGGAGATATTAGGATTCTCACAGAATCAGCTAGAAGGTCCAATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTTACCAATATAATTCTGTGGCAAAACCTTTTATCTGGAGATATTCCCCCAGAGATTGGAAATATCAGCAGGTTGGAATTACTTGCTTTGCATCAAAATTCATTTAGTGGGGCAATCCCGAAGGAGATAGGAAAGTTATCCTGCTTGCAAAGGTTGTACATATACACCAACCACTTGAACGGGACGATTCCACCTGAGCTAGGCAACCTTACAAGTGCCATTGAGATAGATCTTTCTGAGAACCGTTTGAGTGGGATTATTCCACGAGAGTTGGGTCAGATCTCCAATCTTAGTTTGCTTCATCTTTTTGAAAACCTTCTGCAAGGAGAAATCCCCAGGGAGCTTGGGCACTTATGGCTGTTGAGTAAATTAGACTTGTCAATGAATAACCTAACAGGTACAATTCCACTAGAATTTCAAAATCTTACATACATGGAGGATTTGCAGCTATTTGACAATCAACTTGAGGGTAAGATTCCTCCCCATCTTGGAGCTAATAGCAACCTCACTATTCTTGATATATCTGCTAACAATCTTATTGGTATGATACCTCTCCACCTTTGCAAATATAAAAAATTGGAATTTCTGAGCCTTGGGTCAAATAGGTTGCTTGGAAATATTCCATATGACCTGAAAACTTGTAAGTCACTTGTGCAGCTGATGCTGGGTAACAACCTGCTGACAGGGGGCCTTCCTGTTGAATTAAATGAGTTGCATAATCTTTCTGCACTTGAACTTCATCAAAATCGGTTCTCTGGGCTTATAGACCCAGGTATAGGTCAACTTCAGAGTCTAGTGAGGCTTCTCTTGTCAGATAATTATTTTGTTGGGTATCTACCACCTGAGATTGGAAAATTATCACAACTCGTCTCATTCAATGTTTCCTCTAATCTTCTAAGTGGAAGTATTCCTCATGAGTTGGGAAACTGTGTAAAACTACAAAGGCTTGATCTTAGTAGAAATCAATTAACTGGTGCCGTTCCAAATGAAATTGGCAAGCTAGTGAATCTGGAATTATTGAAACTTTCTGATAACAGATTTTCAGGGGCAATACCAAGTGCTTTAGGGGATCTTACGCGTCTTACAGAGCTGGAACTTGGTGGTAACTTGTTTTCAGGGAGCATTCCTGTTCGTTTGGGACGACTTGCTGCTCTTCAGATTGGTCTTAATATGAGCCATAACAAACTATCTGGAATAATTCCTGATAGCCTGGGGAGCTTACAAATGTTGGAATCGCTTTATTTAAATGACAATGATCTTGTTGGTGAAATTCCTGCCTCAATCGGTGATCTGCCCAGCCTTTTAGTATGCAATGTTTCTAACAATAACCTGGTTGGAACTATCCCAAACACTCCTGTATTTCGAAGGATGGATTTCACAAACTTTATTGGAAACAATGGGTTGTGCCGGGAAGGTTCCTTTCATTGTCATCCTTCCATATCTTCGTCTTGTACTCAAAAACCAAGCTGGATCAGAGATGGTTTGTCAAGGGAAAAGATAGTGGTTATTGTTTCAGGTGTAGTTGGATTGGTTTCCCTTATATTCATAGTCTATATATGTTGGGCTATGAAGCGTCGTAGCCCTACTTTTGTCTCATTGGAAGGGCAAACAAAGCCTCATGTCCTAGATAACTATTACTTTCCTAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGAAATTTTTCAGAAGCTGCAATTATAGGAAGTGGAGCATGTGGCACTGTCTATAAGGCTATTATGGCAGATGGTGAAGTGATTGCTGTCAAAAAGCTGAATTCTAATGGAGAAGGAGCAAATGTTGACAGAAGCTTTCTTGCAGAGATCTCAACCCTTGGAAAGATCAGGCACAAAAATATTGTGAAGCTGAATGGATTCTGCTGTCATGAGGATTCTAATATTCTCTTATATGAGTACATGGAAAACGGCAGCCTCGGAGAACAACTCCATGCAAATCCAAAAACATGTTTGCTGGATTGGAATTGTCGATATAAGATTGCCCTTGGAGCTGCAGAAGGCATGCGCTATCTTCATTATGATTGCAAGCCTCAAATCATCCACCGTGATATAAAGTCAAACAACATACTACTTGATGAAATGTTTCAGGCACATGTTGGTGACTTCGGCTTGGCAAAGTTGATTGACTTTTCCTACTCCAAATCCATGTCTGCTGTGGCAGGTTCATATGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTAACTGAGAAATGTGACATCTATAGCTTCGGGGTAGTTTTGTTGGAACTAGTCACTGGCCGTTCACCGGTTCAACCATTGGAACAGGGTGGTGATTTGGTGACATGGGTGAGAAGGGCAATTCAGGCGGCGGTACCAACACCAGAACTATTTGACAAGCGATTGAATTTGAGTGAACAGAGAACAATTGAAGAGATGTCTCTTATTCTCAAAATTGCTTTGTTTTGCACTAGTATGTCTCCTCTTAATAGGCCAACAATGAAAGAGGTCATTGCAATGTTGATTGATGCTAGGGAGTATGTTAGTAATTCTCCTTCAACCCCTACATCAAAATCCCTACTTGATGAAAATGCGTCTTTCAAAGGTTAA 3318 0.4011 MGLEWNFHIQKGFPLMLILWFGVIQVSSINEEGSILLDFKGYLSDPENNLHNWNPSDLTPCNWTGVYCNDSTVTSVNLYHLNLSGSLSPVICKLPHLVELNVSKNFISGRIPDDFALCSSLEILDLCTNKFHGEFRTPMCKIATLRNLYLCENFMYGEVPKEIGNLTSLEELVIYSNNLTGRIPASIGKLKRLKIIRAGLNSLTGPIPAEISECESLEILGFSQNQLEGPIPRELQKLQNLTNIILWQNLLSGDIPPEIGNISRLELLALHQNSFSGAIPKEIGKLSCLQRLYIYTNHLNGTIPPELGNLTSAIEIDLSENRLSGIIPRELGQISNLSLLHLFENLLQGEIPRELGHLWLLSKLDLSMNNLTGTIPLEFQNLTYMEDLQLFDNQLEGKIPPHLGANSNLTILDISANNLIGMIPLHLCKYKKLEFLSLGSNRLLGNIPYDLKTCKSLVQLMLGNNLLTGGLPVELNELHNLSALELHQNRFSGLIDPGIGQLQSLVRLLLSDNYFVGYLPPEIGKLSQLVSFNVSSNLLSGSIPHELGNCVKLQRLDLSRNQLTGAVPNEIGKLVNLELLKLSDNRFSGAIPSALGDLTRLTELELGGNLFSGSIPVRLGRLAALQIGLNMSHNKLSGIIPDSLGSLQMLESLYLNDNDLVGEIPASIGDLPSLLVCNVSNNNLVGTIPNTPVFRRMDFTNFIGNNGLCREGSFHCHPSISSSCTQKPSWIRDGLSREKIVVIVSGVVGLVSLIFIVYICWAMKRRSPTFVSLEGQTKPHVLDNYYFPKEGFTYQDLLEATGNFSEAAIIGSGACGTVYKAIMADGEVIAVKKLNSNGEGANVDRSFLAEISTLGKIRHKNIVKLNGFCCHEDSNILLYEYMENGSLGEQLHANPKTCLLDWNCRYKIALGAAEGMRYLHYDCKPQIIHRDIKSNNILLDEMFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTWVRRAIQAAVPTPELFDKRLNLSEQRTIEEMSLILKIALFCTSMSPLNRPTMKEVIAMLIDAREYVSNSPSTPTSKSLLDENASFKG 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2196 1105 SMART serkin_6 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2196 1105 Gene3D Phosphorylase Kinase; domain 1 772 881 - -
Dere07g2196 1105 ProSiteProfiles Protein kinase domain profile. 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 182 - -
Dere07g2196 1105 SUPERFAMILY RNI-like 363 690 - -
Dere07g2196 1105 Gene3D Ribonuclease Inhibitor 401 728 IPR032675 -
Dere07g2196 1105 MobiDBLite consensus disorder prediction 1085 1105 - -
Dere07g2196 1105 SUPERFAMILY Protein kinase-like (PK-like) 781 1077 IPR011009 -
Dere07g2196 1105 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 881 - -
Dere07g2196 1105 SUPERFAMILY L domain-like 31 300 - -
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 882 1094 - -
Dere07g2196 1105 Gene3D Ribonuclease Inhibitor 280 400 IPR032675 -
Dere07g2196 1105 Gene3D Ribonuclease Inhibitor 180 279 IPR032675 -
Dere07g2196 1105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 408 550 - -
Dere07g2196 1105 SMART LRR_typ_2 647 671 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 526 550 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 478 502 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 166 190 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 94 117 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 598 622 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 286 310 IPR003591 -
Dere07g2196 1105 SMART LRR_typ_2 574 597 IPR003591 -
Dere07g2196 1105 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 280 382 - -
Dere07g2196 1105 MobiDBLite consensus disorder prediction 1085 1099 - -
Dere07g2196 1105 Gene3D Transferase(Phosphotransferase) domain 1 882 1095 - -
Dere07g2196 1105 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 183 279 - -
Dere07g2196 1105 Gene3D Ribonuclease Inhibitor 27 179 IPR032675 -
Dere07g2196 1105 Pfam Leucine Rich Repeat 552 574 IPR001611 GO:0005515
Dere07g2196 1105 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2196 Dere-ChrDere07 38339995 38343559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2196 23 1082 Receptor kinase-like Gene Family AT1G73080 38.031 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere07g2196 Pkinase 4e-47 CL0016