Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2194 ATGTTTATACTAGTCGGCAACGTGCAGAGAACAATGAGTTCTCTGGCTTCCCCGGTGGGTTTGGGAAGCCCCATGGGTGTGAGTTCATCTGGAAGGTCCCGTTCCCTTGTGAGGAGAGTTTCTCTTTCTAAAGCAAACTTTAAGTTTGGAAGGAGGTGGCATTTTGTCTCTTTGTCTGTCTGCGGATATTCGGTGACATCTACTGATTTGATTGCTGACCAAGGTAATGCAGTATCCCTTGATTCTAACCCCAATAAAGGAAGCAAAGTTGGAGATGATAATTCTGTCTTTGCCCTTAAGTCTCCTCCTAAGCCAGTGTTGAAGTCCTCAGAGAGTAACACTGTCTTGGGCATGAATTCTGAGGCTTGGAGCCCCTCAATAATAGCGGAGGACTCTGATGATGAGGATTTACATGACGCAGAAGAGAGGGATGGAGTAATTGAATCGCTTGGAGAGGCGTTGGAGAAGGCTGAAAAGCTGGAACATTCAAAGTTGGATGTTAAAACAAACAATAGTTTAGTAAATAAGCCAGCTAAATCTAAAACAATAACTAATCCGAAGAATGAGAGAGCTGTAAATTTGACTAAAACCCGTAAGACAAAAACTATGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCAACTGTCCAGAAAGTTGTAAAAGAAGCGCCCAAACCTATTAACAAGAATGGAGGACAGGGATCTCGGACAGGTGGAGGGGAAAAGGTTGCATCTCTATCTTACAAACCTTTTAGTACTCCTCAGCCACCTTCAAGACCTCAACCAGTGTTACAAGCTAAACCTTCCGTAGCTTCTCCACCCATAAAAAAACCTGTTGTCTTGAAAGATACGGGGGCAGCCAACACACTTGCGAAAACTAAAGAAAGGAAGCCAATACTGATTGATAAGTTTGCAACCAAGAAACCAGTAATTGATCCTCTAATTGCTCAAGCAGTTCTGGCCCCTCCAAAACCTGGAAAGTGTCCTTCCCCTGGAAAGTTTAAAGATGATTACCGAAAGAAGAGTGCTTTGGCTGGAGGAGGACCAAAGAGACGGATGGTAGAGGATGATGATGAGATTCCTGATGAGGACACATCAGAACTCAATGTCTCTATTTCTGGTGCTGCGACTGCAAGGAAAGGGAGGAAATGGAGTAAAGCAAGCCGAAAGGCAGCAAGACTCCAGGCAGCTAAGGAGGCTGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAATGATAAAGGTATGCTGATAGAGGAGTTAGCCTACAACTTGGCCGTTAGTGAAGGTGAAATCCTGGGTTATTTATACTCCAAGGGGATTAAACCAGAAGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATTGTTTGTAAAGAATATGAGGTGGAAGTCATAGATGCTGATCCTGTCAAAGTTGAACAATTAGTTAAGAAAAGGGAAATTCTTGATGAAGATGACCTTGACAAACTTAAAGATAGGCCTCCTGTCATTACTATAATGGGCCATGTTGATCATGGCAAGACAACTCTTTTGGATTATATTCGTAAGAGCAAGGTAGCTGCATCAGAAGCCGGTGGGATTACACAAGGAATTGGGGCGTATAAAGTGCAAGTACCTGTTGATGGGAAATCTCTGCCTTGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGTGGAGCAAGTGTAACAGACATTGCTATCATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCCATAGCTCATGCCAAAGCAGCAGCAGTACCTATAATGGATAAAGATGGAGCAAATCCGGAACGAGTCATGCAAGAGCTTTCTTCAATTGGGCTAATGCCGGAAGACTGGGGTGGTGACATCCCAATGTTCCAGATAAGTGCTCTCAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTCATGCTTGTTGCAGAGTTGCATGAGCTGAAAGCTAATCCTGATAAGCGTGCAAAAGGCACAGTCATAGAGGCTGGTCTGGATAAATCCAAAGGACCATTTGCTACATTTATTGTGCAGAATGGCACCCTTAGAAGGGGAGATATAATTGTCTGTGGAGAAGCTTTTGGAAAGGTACGAGCTTTATTTGATGATGGTGGAAAACGTGTTGATGTAGCTATGGCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGTCTTTGAGGTTGTTGACTCCCTTGATGCTGCACGTGAAAAGGCAGAGTCCTGTGCCGAGTCACTGCGAAATGTGCGTATTTCAGCTAAGGCAGGGGATGGCAAAGTCACTCTTTCTTCTTTAGCTTCTGCAGTTTCGTCAGGAATTCTTTCTGGACTAGACTTGCACCAACTAAATGTAATCTTGAAGGTTGATCTTCAGGGGTCCATCGAAGCTGTCAGACAAGCTCTACAGGCAATGGAAGGACTCCTGGAGCCTGTTGAGGAACGAGTAACAATTGGCTCAGTAGAAGTACGGGCCACATTTAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACAGAGGGGAAGGTACTAAAAGGCTGTGGAATTCGGGTCATTCGTAAGCGAAAAGTAGTTCATGTTGGCCTTCTTGATTCTTTGAGAAGGGTGAAGGAGATGGCGAATGAGGTAAATGCTGGTCTAGAGTGTGGAATTGGGTTAGAAGACTTCGATGATTGGGAGGAGGGAGATATTCTTGAGGCCTTCAACACACTTCAGAAGAAGCGGACCCTCGAAGAGGCATCGGAATCAATGGCAGCTGCAGTACAAGGAGTATGA 2823 0.4453 MFILVGNVQRTMSSLASPVGLGSPMGVSSSGRSRSLVRRVSLSKANFKFGRRWHFVSLSVCGYSVTSTDLIADQGNAVSLDSNPNKGSKVGDDNSVFALKSPPKPVLKSSESNTVLGMNSEAWSPSIIAEDSDDEDLHDAEERDGVIESLGEALEKAEKLEHSKLDVKTNNSLVNKPAKSKTITNPKNERAVNLTKTRKTKTMKSVWRKGDTVATVQKVVKEAPKPINKNGGQGSRTGGGEKVASLSYKPFSTPQPPSRPQPVLQAKPSVASPPIKKPVVLKDTGAANTLAKTKERKPILIDKFATKKPVIDPLIAQAVLAPPKPGKCPSPGKFKDDYRKKSALAGGGPKRRMVEDDDEIPDEDTSELNVSISGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVNDKGMLIEELAYNLAVSEGEILGYLYSKGIKPEGVQTLDKDMVKIVCKEYEVEVIDADPVKVEQLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPVDGKSLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIMDKDGANPERVMQELSSIGLMPEDWGGDIPMFQISALKGENVDDLLETVMLVAELHELKANPDKRAKGTVIEAGLDKSKGPFATFIVQNGTLRRGDIIVCGEAFGKVRALFDDGGKRVDVAMASIPVQVIGLNNVPIAGDVFEVVDSLDAAREKAESCAESLRNVRISAKAGDGKVTLSSLASAVSSGILSGLDLHQLNVILKVDLQGSIEAVRQALQAMEGLLEPVEERVTIGSVEVRATFSSGSGRVAGCMVTEGKVLKGCGIRVIRKRKVVHVGLLDSLRRVKEMANEVNAGLECGIGLEDFDDWEEGDILEAFNTLQKKRTLEEASESMAAAVQGV 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2194 940 MobiDBLite consensus disorder prediction 82 111 - -
Dere07g2194 940 FunFam Translation initiation factor IF-2 662 780 - -
Dere07g2194 940 CDD mtIF2_IVc 834 916 - -
Dere07g2194 940 Gene3D Translation factors 662 777 - -
Dere07g2194 940 SUPERFAMILY Translation proteins 662 745 IPR009000 -
Dere07g2194 940 Gene3D - 489 661 IPR027417 -
Dere07g2194 940 MobiDBLite consensus disorder prediction 225 271 - -
Dere07g2194 940 FunFam Translation initiation factor IF-2 489 661 - -
Dere07g2194 940 FunFam Translation initiation factor IF-2 828 925 - -
Dere07g2194 940 PRINTS GTP-binding elongation factor signature 496 509 IPR000795 GO:0003924|GO:0005525
Dere07g2194 940 PRINTS GTP-binding elongation factor signature 548 558 IPR000795 GO:0003924|GO:0005525
Dere07g2194 940 PRINTS GTP-binding elongation factor signature 564 575 IPR000795 GO:0003924|GO:0005525
Dere07g2194 940 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 819 932 IPR015760 -
Dere07g2194 940 CDD IF2_mtIF2_II 665 756 IPR044145 -
Dere07g2194 940 NCBIfam small GTP-binding protein domain 494 649 IPR005225 GO:0005525
Dere07g2194 940 MobiDBLite consensus disorder prediction 330 357 - -
Dere07g2194 940 MobiDBLite consensus disorder prediction 322 366 - -
Dere07g2194 940 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 492 659 IPR000795 GO:0003924|GO:0005525
Dere07g2194 940 Pfam Elongation factor Tu GTP binding domain 497 651 IPR000795 GO:0003924|GO:0005525
Dere07g2194 940 SUPERFAMILY Translation proteins 830 924 IPR009000 -
Dere07g2194 940 CDD IF2_eIF5B 495 655 - -
Dere07g2194 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 663 IPR027417 -
Dere07g2194 940 ProSitePatterns Initiation factor 2 signature. 877 899 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dere07g2194 940 NCBIfam translation initiation factor IF-2 414 820 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Dere07g2194 940 Gene3D Translation factors 828 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2194 Dere-ChrDere07 38320713 38330175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2194 493 783 Eukaryotic Initiation Factors Gene Family AT1G76810 31.492 1.18e-22 102