Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2190 ATGAAAGGCAGATCGAAGCACCAAACGAGAACGAAGAGAGAAGAGTCAATTTACAACCTTTTCTCTTTGCTTCTTCCCGACTCGTGGAAGCTGTACTCTGCTTGTTTTCACCAGTTTCTGAGTGCTCTAGATTTTGTTGCTGGGCTTCCGTTCACCCCTGCAATCTCTGTCCCTGTCATGACTTGTTTTCCATTTTTTTTTGGCAAAAAGTTGGATTCCCTGGCAAGGCTAGATCCAGACATTGAAGAAGAATTTTCAGGTCTTCACAATGTCAAACTTTACACATACAAAGAACTAAGAATTGCCACTGAGGATTTTAGTGTTGCCAATAAAATTGGAGAGGGCGGTTTTGGTTCTGTTTTCAAGGGGCGGCTAAAAGGTGGAAAAGTTGCTGCTATCAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAGGGAATTCTTGACAGAGATTAAGATAATCTCAGAAATAGAGCATGAAAATTTAGTTAAGCTGTACGGATGTTGTGTGGAAGGAAATCACAGAATATTGGTTTATAATTACCTTGAGAATAACAGCCTTGCACAAACTCTTATAGGTGGACGCTGTAGCAACATCCAATTCAATTGGCGAACACGGTCTAGAATATGCATTGGGGTTGCACGTGGGATTGCCTTTCTTCACCAGGAAGTAAGCCCGCCTATTGTTCATAGGGATATAAAAGCAAGCAACATTCTTCTTGACAAAGACCTTACGCCCAAGATTTCAGATTTTGGGCTTGCAAAACTTATTCCATCAAATATGACTCATGTCAGCACACGTGTGGCAGGAACTCTAGGTTATTTGGCGCCAGAATATGCAATAGGAGGAAAGCTGACACGGAAAGCTGACATTTATAGTTTTGGAGTGCTCCTTGTGGAGATTGTCAGCGGGAGATGTAACATAAATACACAATTACCAGTTGAAGAACAGTACATTTTAGAAACGACATGGGATCTTTACGAGCGAAGGGAAATGGTAAGGCTGGTAGATGTAGCGCTAAATGGGGAGTTTGATGCTGAGGAGGCTTGCAACTTTCTGAAGATTGGCCTCCTTTGCACTCAGGATGATCCGAAGCTCCGGCCATCCATGCCTTTGGTGGTCAAGATGCTCACAGGCGAAATGGATGTTGATGTCAGGAATATAACAAAGCCAGCCTTGATTTCTGATTTTATGGACCTTAAAGTCAGTAAAAAACCAAAAAGTAATGTTGATATGAAGACTCGGACTTCATCTTCATACAGTTCATCCTCACCCGCGTATACTACATTTTCATCAGCTGCTTCAACTGCTGCAACTACAACCTTCACGGCACTATATGATCGAAGCATGTAA 1353 0.422 MKGRSKHQTRTKREESIYNLFSLLLPDSWKLYSACFHQFLSALDFVAGLPFTPAISVPVMTCFPFFFGKKLDSLARLDPDIEEEFSGLHNVKLYTYKELRIATEDFSVANKIGEGGFGSVFKGRLKGGKVAAIKVLSAESRQGVREFLTEIKIISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGRCSNIQFNWRTRSRICIGVARGIAFLHQEVSPPIVHRDIKASNILLDKDLTPKISDFGLAKLIPSNMTHVSTRVAGTLGYLAPEYAIGGKLTRKADIYSFGVLLVEIVSGRCNINTQLPVEEQYILETTWDLYERREMVRLVDVALNGEFDAEEACNFLKIGLLCTQDDPKLRPSMPLVVKMLTGEMDVDVRNITKPALISDFMDLKVSKKPKSNVDMKTRTSSSYSSSSPAYTTFSSAASTAATTTFTALYDRSM 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2190 450 Pfam Protein kinase domain 107 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2190 450 Gene3D Transferase(Phosphotransferase) domain 1 182 392 - -
Dere07g2190 450 MobiDBLite consensus disorder prediction 408 427 - -
Dere07g2190 450 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 56 420 - -
Dere07g2190 450 Gene3D Phosphorylase Kinase; domain 1 78 181 - -
Dere07g2190 450 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Dere07g2190 450 CDD STKc_IRAK 112 379 - -
Dere07g2190 450 FunFam cold-responsive protein kinase 1 182 393 - -
Dere07g2190 450 SMART serkin_6 106 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2190 450 ProSiteProfiles Protein kinase domain profile. 106 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2190 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Dere07g2190 450 FunFam cold-responsive protein kinase 1 78 181 - -
Dere07g2190 450 SUPERFAMILY Protein kinase-like (PK-like) 85 377 IPR011009 -
Dere07g2190 450 MobiDBLite consensus disorder prediction 412 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2190 Dere-ChrDere07 38245093 38251935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2190 94 433 Receptor kinase-like Gene Family AT1G56120 49.706 4.12e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g2190 Pkinase 4.6e-47 CL0016