Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2173 ATGGATGAGTATTTGGAAGACGAAGTCGAACTTCCAGGGTTTCGGTTCCATCCCACAGATGAGGAACTTGTGAGTTTTTACCTCAGAAGGAAACTTGACAAGAAGCCTATCAGTATCGAACTTATCAAACAGATTGATATTTACAAATACGATCCTTGGGATCTTCCGAAGGCTAGTTATAGCAGAGGTGGAGATCAGAAGGAGTGGTACTTCTATTGCAGAAGGGGGAGGAAGTATAGGAACAGTGTAAGGCCAAATAGAGTGACAGGGTCGGGGTTCTGGAAAGCAACAGGGATAGACAAAGCAGTGTATTCTCATGGAGGAGAAGGAAATGACTGTATTGGCCTCAAGAAAACCCTCGTCTACTATCGTGGCAGTGCTGGCAAAGGCACCAAAACTGACTGGATGATGCATGAGTTTCGCCTTCCCTCCAAAAATGACCAAGAAGCTGAAATTTGGACATTGTGTAGAATTTTCAAAAGAAATGTGTCACAAAGAAAGTGCATACCAGATTGGAGACATGCTACGAAGCGTCATTCCATTGACAAGAGCACCAGATCAATAAGCAGTAGTACTGTGGAGTCTTGTAATAGTACTGTTACTAATAATCAAGAAGCATACATCAGCTTTGGAGGCAGCCATGAGCAGAAACCTATTATAAGAAATAACTGCACAAGTCATTATCATTACAACGATCAAAGGAGTAATCACGTAACAAGCCAGTTCATTCCTTTAGTACAGCAGCCTCATCCAGTAACTGCACCACCGCCACCATCATCATCGTCATCGGCTTTCAGCTTCTGGATTAACCAGCAGGCTTCCAATGACTTGTTTGATTTTGAGAAATCATGGGATGAGCTTGGATCAGTCGTGTTTGCTCTTGATTAG 888 0.4291 MDEYLEDEVELPGFRFHPTDEELVSFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASYSRGGDQKEWYFYCRRGRKYRNSVRPNRVTGSGFWKATGIDKAVYSHGGEGNDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSKNDQEAEIWTLCRIFKRNVSQRKCIPDWRHATKRHSIDKSTRSISSSTVESCNSTVTNNQEAYISFGGSHEQKPIIRNNCTSHYHYNDQRSNHVTSQFIPLVQQPHPVTAPPPPSSSSSAFSFWINQQASNDLFDFEKSWDELGSVVFALD 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2173 295 FunFam NAC domain-containing protein 35 19 164 - -
Dere07g2173 295 SUPERFAMILY NAC domain 8 161 IPR036093 GO:0003677|GO:0006355
Dere07g2173 295 Gene3D NAC domain 19 166 IPR036093 GO:0003677|GO:0006355
Dere07g2173 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 225 - -
Dere07g2173 295 ProSiteProfiles NAC domain profile. 10 161 IPR003441 GO:0003677|GO:0006355
Dere07g2173 295 Pfam No apical meristem (NAM) protein 12 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2173 Dere-ChrDere07 38101283 38103167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2173 2 161 NAC Transcription Factor Family AT1G26870 62.712 4.05e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g2173 NAM 2.2e-35 No_clan