Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2169 ATGGCTGGAATGTTGCCTGGTGATGTCTCTCAAAATGGAACTTATCAAAGTGGTTCTAACAGATACTCTGGAGAGAGGTTGGAGGAAGATCCTGGTTGGTATTTTACTAGGAAGCAGATTGAAGAAAATTCACCTTCCAAAAGAGATGGTATAGATTGGAAGAAAGAGATTTACATGCGCAGATCGTACTGCACATTTTTACAAGATTTAGGCATGAGACTCAAAGTACCTCAGGTTACCATTGCTACAGCAATAATTTTTTGTCATCGATTCTTTCTTCGTCATTCCTTAGGGAGGAATGATAGGAGGACTGTTGCAACAGTGTGTATGTTTCTTGCTGGCAAGGTTGAAGAAACTCCTCGCCCTTTGAAAGATGTAATTATTGTTTCATATGAAATAATGAATAAGAAGGACCCTGTGGCTGCTCAAAGAATCAAACAAAAGGAGGTGTATGAACAGCAGAAAGAATTAATCCTAGCTGGAGAAAGGATTGTTCTCCAAACTCTTGGTTTTGATCTTAATCTGCACCATCCTTATAAACCTCTTGTTGAGGCTATTAAGAAATTCAAAGTTGCTCAAAATGCCCTTGCTCAAGTGGCATGGAATTTCGTAAATGATGGACTTCGGACATCTCTTTGCTTGCAATTCCAGCCCCACCATATTGCAGCAGGAGCTATTTTCCTTGCTGCCAAGTTTCTTAAGGTGAAGCTCCCTTCAGATGGGGAGAAGGTCTGGTGGCAAGAATTTGATGTTACCCCTCGGCAATTGGAGGAAGTCAGTAATCAAATGTTGGAGCTATATGAACAAAACCGAGTGCCACCATCCAATGATATTGAAGGATCTATAGGAGTTGGGGCCACTAATCGGGCTGCTGCAAAGGTTCCTGCTAGCAATGATGAAAATGCAACTACAAACATTAATTCTCAGCCTGGAGCAACAAGTTTAAGACTTGAACCCTCTAAGGCTGCTGCTTCTAAGACACTGTTTGATTCATGTGCTACCAATCATGTTGAACACCCAGTGTCGAACCATGGTAGAAGTAGTGATTTTGGGGGCACAGAAATGAAACACAGGACGGAAGATGAAGCCAAAGCTAATCATCATCTTGAGTGTGAAACTCCGCCACATAAGGAAAACTTGCAGGAAGCTCTAGACATGGTGAGATCTCGATCAGGTTATGGTGAAGAGCAAGAAAGCAATCTTGGGAAAAGTGAATTGAAGGAGGCTGCTGAATTGAAAGTTAAACAAACCAACAGAAACCTAGATCACAGAGATAATACATCTGGGCGACCACATCAGGAAGCTATTAAAAAAATTGACAGAGAGAGGGTAAAGGCTGCACTTGAGAAACGAAGGAAAGCATTTGGTCCAATAACTAAAAAATCAGAGGTTATGGATGATGATGATCTCATTGAGAGGGAACTGGAGGATGGAATTGAACTTGCTGCTCAGAGTGAAAAGAACAAGCAGGATAGGCGGCAGAGCTGGTCTAATAGGTCAGATAATGGAAATATGCAGCATGGAAGGCATCAAGATCATGCAGATGAATATCATCAAGATGTAAAGAGCCTGTCATCATATGAGCCTGATCTATGTACTGTGGAAGAAGGGGAGGTATCAGCACTTGATGACATTGGCCCTGGACTTCAGTCACCCAAGTCAGGCAATCGCAAGAGAAAGGCTGGGAGCTCTCCTGATAGAGTATTGGAGGGGAAGCCACGTCACCCCCATAATCGTTATGATATTGAAGATCGAAACAAGGTCAGCCGACTTGGTCATTCTGAGAGGGACAGTAAAAGGCATTTACAAGAAAATCATGTTTGA 1824 0.4232 MAGMLPGDVSQNGTYQSGSNRYSGERLEEDPGWYFTRKQIEENSPSKRDGIDWKKEIYMRRSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRHSLGRNDRRTVATVCMFLAGKVEETPRPLKDVIIVSYEIMNKKDPVAAQRIKQKEVYEQQKELILAGERIVLQTLGFDLNLHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFQPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSNDIEGSIGVGATNRAAAKVPASNDENATTNINSQPGATSLRLEPSKAAASKTLFDSCATNHVEHPVSNHGRSSDFGGTEMKHRTEDEAKANHHLECETPPHKENLQEALDMVRSRSGYGEEQESNLGKSELKEAAELKVKQTNRNLDHRDNTSGRPHQEAIKKIDRERVKAALEKRRKAFGPITKKSEVMDDDDLIERELEDGIELAAQSEKNKQDRRQSWSNRSDNGNMQHGRHQDHADEYHQDVKSLSSYEPDLCTVEEGEVSALDDIGPGLQSPKSGNRKRKAGSSPDRVLEGKPRHPHNRYDIEDRNKVSRLGHSERDSKRHLQENHV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2169 607 SUPERFAMILY Cyclin-like 176 272 IPR036915 -
Dere07g2169 607 MobiDBLite consensus disorder prediction 1 27 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 417 437 - -
Dere07g2169 607 SUPERFAMILY Cyclin-like 33 174 IPR036915 -
Dere07g2169 607 CDD CYCLIN_AcCycT_rpt1 49 172 - -
Dere07g2169 607 FunFam Cyclin-T1-5 like 175 279 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 559 607 - -
Dere07g2169 607 SMART cyclin_7 65 167 IPR013763 -
Dere07g2169 607 SMART cyclin_7 180 265 IPR013763 -
Dere07g2169 607 PANTHER CYCLIN 33 335 IPR043198 GO:0006357|GO:0016538
Dere07g2169 607 MobiDBLite consensus disorder prediction 482 496 - -
Dere07g2169 607 Gene3D - 175 277 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 505 523 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 294 319 - -
Dere07g2169 607 Pfam Cyclin, N-terminal domain 40 174 IPR006671 -
Dere07g2169 607 MobiDBLite consensus disorder prediction 337 358 - -
Dere07g2169 607 Gene3D - 22 173 - -
Dere07g2169 607 CDD CYCLIN_AcCycT_rpt2 176 268 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 297 315 - -
Dere07g2169 607 MobiDBLite consensus disorder prediction 482 607 - -
Dere07g2169 607 FunFam Cyclin-T1-5 like 23 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2169 Dere-ChrDere07 38037516 38044353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2169 55 182 Core Cell Cycle Gene Families AT5G27620 26.562 4.32e-06 47.0