Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2168 ATGGCAGCTTCACCATCAAACAGGATCGAACGCGCTCATATGATGTACCGTGACGGACGGTACGAAGAGGCGCTAGGGTTCTACACCGAAGCTATTGGGATGGCTAGGACAAAGGCCCAGAAGATCGCTTTGCATAGCAATCGAGCGGCTTGTTATCTAAAGCTTCATGATTTCAAAAAGGCAGCAGAAGAATGTACCTCAGTGGTTGAGCTTGACCACAAGCACAGTGGAGCACTCATGCTGCGAGCTCAAACACTAGTAACCCTTAAGGAATACCATTCAGCACTTTTTGATGTCAACAGACTCTTAGAGTTGAATCCATCCTCAGAGGTCTATCAAAATTTGCAAGCTCGCTTGAAGACACAATTGTCACTTGCTCCAATACCAGAGTCAGAAGAGGAGTTTGAAGAACAGGAAGATGACAATGAAGAGGTAATACTAAAAAAAGATGATAAAGAAGCAACTGGAAAGAAATATGCAGTAACTTTTAATGTTGGAGAAGATAAGAAGGACGAGCTTGGGAAGACTACCACCAACACATTTGATGCCCTTGAAACAAAGGCTAAGTTATCATCGGAACAGGAAAGAGACAAAATGAAGCCTGAAAGGTCCACTGAAGAAGTTCTTGCCTCTAAAGCACCAGAAAAGGAATCATTTGAGAAACATTCCAAAGGATGGCAATCAATTCCAAAACCAAAAGGACACTCTGCTTTAGATTATGCACGTTGGGACAGTGTTGAAGATGATTCTAGTGAAGATGATGATGATGATGATGAAGAAGAATCGATGCCCCAATACCAATTCCGTGTTAGAACCATTGGTGTACGTCCAGTGAAGTGA 840 0.4274 MAASPSNRIERAHMMYRDGRYEEALGFYTEAIGMARTKAQKIALHSNRAACYLKLHDFKKAAEECTSVVELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLSLAPIPESEEEFEEQEDDNEEVILKKDDKEATGKKYAVTFNVGEDKKDELGKTTTNTFDALETKAKLSSEQERDKMKPERSTEEVLASKAPEKESFEKHSKGWQSIPKPKGHSALDYARWDSVEDDSSEDDDDDDEEESMPQYQFRVRTIGVRPVK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2168 279 MobiDBLite consensus disorder prediction 130 144 - -
Dere07g2168 279 MobiDBLite consensus disorder prediction 246 262 - -
Dere07g2168 279 SMART tpr_5 5 38 IPR019734 GO:0005515
Dere07g2168 279 SMART tpr_5 42 75 IPR019734 GO:0005515
Dere07g2168 279 SMART tpr_5 76 109 IPR019734 GO:0005515
Dere07g2168 279 Gene3D Tetratricopeptide repeat domain 3 125 IPR011990 GO:0005515
Dere07g2168 279 Coils Coil 128 148 - -
Dere07g2168 279 MobiDBLite consensus disorder prediction 185 279 - -
Dere07g2168 279 MobiDBLite consensus disorder prediction 129 149 - -
Dere07g2168 279 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 279 - -
Dere07g2168 279 SUPERFAMILY TPR-like 9 123 IPR011990 GO:0005515
Dere07g2168 279 MobiDBLite consensus disorder prediction 188 227 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2168 4 123 Calmodulin-binding Proteins AT3G25230 32.576 2.05e-13 68.2