Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2157 ATGAAGCAGTTGATTTGCAGGCTGTCGCGAGTGGCGGACTCGTCGCAGTACACTCTGCTCCGATCGGACCAGCAGAACCGGCGAGCTCGGAGGGCGGAGTCATTCCGATCGGTGGCGGCCGCGAAGCTCCGGCTCTCACGTGCGAGGACGGAGGTGCCGGAAGGTCACGTGCCGATCTACGTAGGGGAGGAGATGGAGAGATTCGTGGTGAGCGCGGAGCTGTTGAACCACCCGATCTTCGTGGAGCTTCTGAACAAATCGGCGCAGGAGTACGGGTACGAGCAGCAGGGCGTGCTCCGAATTCCCTGCCACGTCGTCGTGTTCGAGCGCGTGCTCAAGGCGCTCCGTCTCGGCCACGACGACGACGACGACGCGCGTGCTATTCACGACCTCCTCAATTCTTCTTCCTCTGACGAGTTTTGCTACTAG 429 0.6154 MKQLICRLSRVADSSQYTLLRSDQQNRRARRAESFRSVAAAKLRLSRARTEVPEGHVPIYVGEEMERFVVSAELLNHPIFVELLNKSAQEYGYEQQGVLRIPCHVVVFERVLKALRLGHDDDDDARAIHDLLNSSSSDEFCY 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2157 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 111 IPR003676 GO:0009733
Dere07g2157 142 Pfam Auxin responsive protein 14 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2157 Dere-ChrDere07 37853337 37853765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2157 16 125 Calmodulin-binding Proteins AT3G43120 31.818 2.69e-17 72.0