Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2120 ATGGAACAATCGAGAGTCCTCCAACAGCTTCAATGCAGTACCATGGAACCTAGAAATGAGGAAGTGCAGCCTGCATCGCAGTTAGTAATGCAGGACCATCTGGATGCCATGCATACTAGTAGAAGGCCTTCTGACCTCAATACATCAGATGTTAAACCTGTACTTAATTACTCCATACAGACTGGTGAGGAATTTGCTCTCGAATTTATGCGAGACAGAGTAAACCTCAGGCAGCCTGTATTTCCAAATGCTGGTGATCCCAATGGTGCAACAGGTTATATAAAACTGAAAGACATTCTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCAGATATATCTATGCTCTCAATGGTTGAAAAAGGTCCAAAAGAGTTGGACAAAAAGAACACATCATTACATGGAGAGAGAAGCAATTATGGGTCAATTTGCTCATTACCAAGAACCTCATTCAATCAGGACAATAGTCGCTTTGTGCATGGGTACACCTCTTCAGGTGGCTCTGATAGCTCATCAAGGGCGATGAAGGTTCTTTGCAGCTTTGGTGGTAGAATATTACCTCGGCCAAGTGATGGAAAGCTAAGGTATGTTGGAGGTGAAACACGCATGATCCGTATAAGAAAAGACATATCTTGGCAGGAACTCATGCATAAAACATTGTCAATCTATAATCAGGCTCATATACTTAAGTATCAGCTTCCTGGGGAAGAGCTTGATGCTTTGGTATCAGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTGGACAATAGAGAAGGATTGGAAAAGCTTCGGATGTTTTTATTTTCATTGAGTGATTTGGAGGAGGCTCAGTTTGGTCTCAGTAGCACAGGTGATGATTCTGAGGTCCAATTTGTTATTGCTGTCAATGGTATGGATTTGGGATCAACAAACAACTCATCCCTTCCTGGTGTGAGCTCTTCCACAAATAATATACATGGCTCTGACAGGCAAAATATCGAGAGGGGGACTAGTAGAGTTGCTGTGGAATCTATGGGTATCAGCAATGCTCCCTTGATTGGCAAAATTGATTCATCATTAACTATTCAGTCTTCACAACCAATGCCGCCATCTTCCTCAAATGCTTACGAAACCTATCCGCTGTTTTATGGTGATCAGATGATGCGTCTTGGTGAAACCAGTAGCCAATATCCAATTCACCATGGCCTTAATCCTTCTCAGAACCCTGCTATTCAAGAGACCCCTGTTACTGGTCCTCTTCATGGGATGATTAATCAACTAGGGATTTTAAATGAGAGCCATGTATCAAGTGGATTACAAGTACAGAATTCTGAAATTCCAGCAATGCAGGTGACAAAAATGGGCGATAGTTCAGCTCAACAAAGAAGTGACCCTGGGCAAGTTTTAGCCAGGGAAACACAATCTCATGTTCCCTCACAGCCATTTGATGGTTACTTGAAAAATAATTTTCCTGAACCAACAGTAGCAGTTTCTGCACAAGAGGAGCATAGAACTTCATCACCTTCAACCAAAAAAGACCAGCACCAGGATTGTCAAGAGGCCTCTTCTACATCTAGCAGTGCATTTGATCATGCTAATGTTGATTCCCAGTCCATCCCATATGATTTGAGTTGTCTTCACCCTCCTCCTCTTCCAAAGAGAGTTTACTATTCAGAAAGAACTCCCAGGGAGCAAGTAGAGCTTCTGAGTCGTTCCTCAAAGTCTGATGACACACAGGGTTCTCAGTTTCTCGTGTCAGATTTACTTTCTGATATCAACCCACAGGGTTCAGTTACAGAATCTGGTGACAACATGGATGAGGGAAATCTGTCCAATTGTTCTGAGGAATTGAACACTGCAGCAAAGCCCTTGCATGCAGATGGCCACACTATCAATAATGGATTTGCCAGATCACCATTATACATGCCTGATGTGAGTAGTCAGATGAAATTTAAGCCATCCGAATATGCGGATCCTGAACTAAAGCAGGTATTACCAAACAATGAAGGAAGTAATGATGTGGTAAATGAGGATCAGATTAATAGGTTGAAAACTGAAAGCTATTGTAAAGATAACCACAACAAGCCTCTGCATGATGAAAACAATATCAGTAAACTAGACCTTCCATCTTTGCACCAGGTTCCTTCTATTAATCACCATGATGTTCCAGCATCTAATCTTCCAGAAATTAATTGGGGTGACACCTATGGGAAGGAATCCAATGACTGTATGACGCAAGCACAACCTGTTTCTTTAACTGGGAATACAGCTGAAGATGTATCTCAAGATTTTCCCTCAAATGCTGTTTCCAAACAAGCACAAGGTGATATTCTTATTGATATTGATGATCGATTTCCTCGTGAATTGCTTTCTGATATGTTCTCTAAAGCAATACTTGCAGAAGATTCCTCTGGTCTACTTCCACTAACCAAGGATGGAGTGAGCGTAAGCATAAACATGGAAAATCATGAACCAAAGCGATGGTCATATTTTCATAAATTGGCACAAGAAGTGCTTGATGATGTGTCTCTTATTGATCGAGATCATCTTGATTTTTCACCTGCACTAGGAAAAGAAGCTGGGGATAATAAAATTCACCTGGTTACACCTCCAACAACTGATGGAGTTTCTGTAGATCATGTGGATCCCCACCCCAATTTTGGTGAAGAAAATAAGAAAGACTTGCATGGAATGATTGGAACAGAAACCACTGTACTGCATTCAAATTATGGTCATACTCATTCCCAAGTGAAGGATACTGAAAGCATGCAGTTTGAAGCTATGATGGGAAACATAAGAGCACAAGAATCAGAGTACGAGGATGTGAAGTTTGAAAAAAGAGACAGTAATCTACCACCTCTTGATCCTTCTTTAGGAGATGTTGATATCAGTACTCTGCAGGTCATAAAGAATGAAGATCTTGAAGAGTTGAGGGAACTGGGTTCTGGTACCTTTGGGACTGTATATCATGGAAAATGGAGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTACGGAGTGGTTCAGGATGGACCAGGCGGAACGATGGCCACTGTTACTGAATACATGGTGGATGGTTCTCTTCGGCATGTATTACTTCGCAAGGATAGATATCTTGATCGTAGGAAGAGATTGATTATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTTAACATGAAAGACACTTTACGGCCAATCTGCAAGGTTGGGGATTTTGGATTGTCAAAAATCAAACGAAATACCCTCGTCTCTGGTGGTGTGCGGGGAACTTTGCCTTGGATGGCACCAGAGCTGCTGAATGGCAGCAGCAACAAGGTCTCCGAAAAGGTTGATGTATTTTCCTTTGGCATAGTATTATGGGAAATTCTAACGGGTGAGGAGCCATACGCCAATATGCACTATGGTGCAATCATAGGTGGGATAGTAAACAACACATTACGGCCTACAATCCCAAGTTATTGTGATTCAGAATGGAGGACACTGATGGAGCAATGTTGGGCACCAAACCCTGCAGCCAGGCCATCCTTCACCGAAATTGCTAGTCGCTTGCGTGTAATGTCGGCAGCAGCTAGCCAATCCAAAGCACAAGGCCATAAGGCAGCTAAATGA 3768 0.4191 MEQSRVLQQLQCSTMEPRNEEVQPASQLVMQDHLDAMHTSRRPSDLNTSDVKPVLNYSIQTGEEFALEFMRDRVNLRQPVFPNAGDPNGATGYIKLKDILGISHAGSESGSDISMLSMVEKGPKELDKKNTSLHGERSNYGSICSLPRTSFNQDNSRFVHGYTSSGGSDSSSRAMKVLCSFGGRILPRPSDGKLRYVGGETRMIRIRKDISWQELMHKTLSIYNQAHILKYQLPGEELDALVSVSSDEDLQNMMEECNHLDNREGLEKLRMFLFSLSDLEEAQFGLSSTGDDSEVQFVIAVNGMDLGSTNNSSLPGVSSSTNNIHGSDRQNIERGTSRVAVESMGISNAPLIGKIDSSLTIQSSQPMPPSSSNAYETYPLFYGDQMMRLGETSSQYPIHHGLNPSQNPAIQETPVTGPLHGMINQLGILNESHVSSGLQVQNSEIPAMQVTKMGDSSAQQRSDPGQVLARETQSHVPSQPFDGYLKNNFPEPTVAVSAQEEHRTSSPSTKKDQHQDCQEASSTSSSAFDHANVDSQSIPYDLSCLHPPPLPKRVYYSERTPREQVELLSRSSKSDDTQGSQFLVSDLLSDINPQGSVTESGDNMDEGNLSNCSEELNTAAKPLHADGHTINNGFARSPLYMPDVSSQMKFKPSEYADPELKQVLPNNEGSNDVVNEDQINRLKTESYCKDNHNKPLHDENNISKLDLPSLHQVPSINHHDVPASNLPEINWGDTYGKESNDCMTQAQPVSLTGNTAEDVSQDFPSNAVSKQAQGDILIDIDDRFPRELLSDMFSKAILAEDSSGLLPLTKDGVSVSINMENHEPKRWSYFHKLAQEVLDDVSLIDRDHLDFSPALGKEAGDNKIHLVTPPTTDGVSVDHVDPHPNFGEENKKDLHGMIGTETTVLHSNYGHTHSQVKDTESMQFEAMMGNIRAQESEYEDVKFEKRDSNLPPLDPSLGDVDISTLQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMKDTLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQSKAQGHKAAK 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2120 1255 CDD PB1_UP2 178 274 - -
Dere07g2120 1255 PANTHER SERINE-THREONINE PROTEIN KINASE 219 1237 - -
Dere07g2120 1255 ProSiteProfiles Protein kinase domain profile. 973 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2120 1255 MobiDBLite consensus disorder prediction 451 529 - -
Dere07g2120 1255 SMART serkin_6 973 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2120 1255 CDD STKc_MAP3K-like 979 1236 - -
Dere07g2120 1255 Pfam Protein tyrosine and serine/threonine kinase 974 1236 IPR001245 GO:0004672|GO:0006468
Dere07g2120 1255 MobiDBLite consensus disorder prediction 451 481 - -
Dere07g2120 1255 PRINTS Tyrosine kinase catalytic domain signature 1207 1229 IPR001245 GO:0004672|GO:0006468
Dere07g2120 1255 PRINTS Tyrosine kinase catalytic domain signature 1055 1068 IPR001245 GO:0004672|GO:0006468
Dere07g2120 1255 PRINTS Tyrosine kinase catalytic domain signature 1163 1185 IPR001245 GO:0004672|GO:0006468
Dere07g2120 1255 PRINTS Tyrosine kinase catalytic domain signature 1092 1110 IPR001245 GO:0004672|GO:0006468
Dere07g2120 1255 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1061 1253 - -
Dere07g2120 1255 ProSitePatterns Protein kinases ATP-binding region signature. 979 1004 IPR017441 GO:0005524
Dere07g2120 1255 SUPERFAMILY CAD & PB1 domains 190 278 - -
Dere07g2120 1255 Gene3D Phosphorylase Kinase; domain 1 966 1060 - -
Dere07g2120 1255 MobiDBLite consensus disorder prediction 310 329 - -
Dere07g2120 1255 SUPERFAMILY Protein kinase-like (PK-like) 963 1235 IPR011009 -
Dere07g2120 1255 Gene3D Transferase(Phosphotransferase) domain 1 1061 1255 - -
Dere07g2120 1255 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 966 1060 - -
Dere07g2120 1255 Pfam PB1 domain 191 275 IPR000270 GO:0005515
Dere07g2120 1255 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 194 276 - -
Dere07g2120 1255 Gene3D - 193 275 - -
Dere07g2120 1255 SMART PB1_new 189 276 IPR000270 GO:0005515
Dere07g2120 1255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1098 1110 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2120 Dere-ChrDere07 37216435 37222934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2120 1 1165 MAP Kinase Kinase Kinase AT1G79570 43.187 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dere07g2120 PK_Tyr_Ser-Thr 3.9e-63 CL0016