Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2097 ATGACTCCAGTGAATCTCCCACCTGGATTTAGGTTCCATCCAACCGATGAAGAACTTGTTGCTTATTACTTGGAAAGAAAAATAACAGGTCGCTCAATAGAGCTTGAGATTATCCCAGAAGTTGATCTATACAAATGTGAACCTTGGGATTTGCCAGATAAGTCATTCTTGCCAAGCAAAGATATGGAGTGGTACTTCTACAGTCCAAGGGATAGAAAGTATCCAAATGGGTCAAGAACTAATAGAGCAACAAGAGCTGGTTATTGGAAAGCAACAGGGAAAGATAGGCCAGTGAATTCTCTGAAGCGACCAATTGGGATGAAGAAGACGTTGGTGTATTATAGAGGTCGAGCTCCTCATGGCATTAGAACCAACTGGGTTATGCACGAGTATCGCCTCATTGATTCAGAACCTGGAAATGCCTTCTCATCTTTAAAGGATTCCTATTCATTGTGTCGCGTTTTTAAGAAGACAGTTGATCAAACCTCAGAATTACCTAAAGAAGATAAAAATATGGAAACAAAGATGGAATTTCCGGGACTTGAGGAGGAAGACAAAGTTCTGAATCATGACAATTCTAATAATAAAGTTCCTAATTGTGATGCTTCTTCTTCGGATCTCACCCAAGGAACACCCACTGAAACTGGTATTGTAGATGATTTTCGTGCACAATTTGCTTGTGATGAAGCAAACAGCGTAGCTTATTCCTATTCTCTTGGTATAATGGAGTACCCATCAAATCTATTCCAGGATCTAGAGCTACCTATCTATGGAGGCATGCATGATCAACTTCCACCATGCACACCTTTGAAGCTGGAAGATTTCCCTCAAATAAAGTTAGCAGAGACAAAGCCACGGAAGCCTGAAATGACTGGCCACTGCATTATATATGACAAATACAAGGACTGTATGTATGGAACACTAGAAGAGATCATCTCTTTGTGTTCTTCTGAAGATATACAATTCTAG 969 0.4014 MTPVNLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRPVNSLKRPIGMKKTLVYYRGRAPHGIRTNWVMHEYRLIDSEPGNAFSSLKDSYSLCRVFKKTVDQTSELPKEDKNMETKMEFPGLEEEDKVLNHDNSNNKVPNCDASSSDLTQGTPTETGIVDDFRAQFACDEANSVAYSYSLGIMEYPSNLFQDLELPIYGGMHDQLPPCTPLKLEDFPQIKLAETKPRKPEMTGHCIIYDKYKDCMYGTLEEIISLCSSEDIQF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2097 322 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Dere07g2097 322 MobiDBLite consensus disorder prediction 190 209 - -
Dere07g2097 322 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Dere07g2097 322 MobiDBLite consensus disorder prediction 192 209 - -
Dere07g2097 322 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Dere07g2097 322 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 197 - -
Dere07g2097 322 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Dere07g2097 322 FunFam Nac domain-containing protein 86 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2097 Dere-ChrDere07 35045509 35049259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2097 1 313 NAC Transcription Factor Family AT1G54330 51.506 3.04e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g2097 NAM 1.8e-39 No_clan