Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2094 ATGAATTCTCAAGACAGAGGCATGTGCGTTCAACCTGACTCTGGCCTCGTCCTCACCACTGATCCCAAGCCTCGCCTTCGCTGGACCGTCGAACTCCATGAACGCTTCGTCGATGCTGTCACTCAGCTTGGAGGCCCTGATAAGGCAACTCCCAAAACGATCATGAGGGTTATGGGTGTGAAGGGTCTCACTCTTTACCACCTAAAGAGCCACCTTCAGAAATTTAGGCTTGGAAAGCAGCCCCACAAGGATTTTAATGATCATTCTATTAAGGATGCTTCGGCTTTAGAACTTCAACGAAATTCTGCCTCCTCTTCCGCCATGATTGGTCGCAATATGAACGAGATGCAAATGGAGGTGCAGAGAAGACTTCACGAACAACTAGAGGTTCAAAAACATCTTCAGCTGAGGATTGAAGCTCAAGGGAAATACTTGCAGAGCATATTGGAAAAGGCTTATCAAACACTTGCAGGTGAAAATTTGAAGGGAATTAATGGAGCTCATCATCCTCATCATCAAGACAATATGATCCCTCAAGATTTCAGTTCGATCCCTCTGAATAATAACTTCCCTTCTTTTCAAGACCTCAACATCTATGGTGGTGGTGGAGATCAGCTCGATCTTCATCATCATCAGTTCATACCAAACAGCAGTAACAATGAAAACCTGTGTGTGGGCATGTCCAAGAACAAGAGGCCATTAATCTGGAACAATGAAGATCTAAGGCTTCATCAAGATCTAGGAACAGCCTCTTCATGTCTTGATACTGATCCTTTCAAGGACGTGTCCCTTGATAGAGGCAGTACAGAGAATCTTAATATTGATCCAATCTCAGAGATCTATGACACTAAGCCCTTACTTCAAGAGGACACTATAGGGGACACTCCAACTAATAAGAAGCTTGAAAGGCCATCACCACGTAGGGCACCTACCCTTCAGCAGGCAGATCACAGGATGAGCCCTATGATTAGTACTGGTACACCATTCTAG 990 0.4485 MNSQDRGMCVQPDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDASALELQRNSASSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYLQSILEKAYQTLAGENLKGINGAHHPHHQDNMIPQDFSSIPLNNNFPSFQDLNIYGGGGDQLDLHHHQFIPNSSNNENLCVGMSKNKRPLIWNNEDLRLHQDLGTASSCLDTDPFKDVSLDRGSTENLNIDPISEIYDTKPLLQEDTIGDTPTNKKLERPSPRRAPTLQQADHRMSPMISTGTPF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2094 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 80 IPR017930 -
Dere07g2094 329 MobiDBLite consensus disorder prediction 285 329 - -
Dere07g2094 329 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 78 IPR006447 GO:0003677
Dere07g2094 329 Gene3D - 22 80 - -
Dere07g2094 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 173 IPR044848 GO:0003700
Dere07g2094 329 FunFam Myb family transcription factor 22 80 - -
Dere07g2094 329 Pfam MYB-CC type transfactor, LHEQLE motif 116 155 IPR025756 -
Dere07g2094 329 Pfam Myb-like DNA-binding domain 26 74 IPR001005 -
Dere07g2094 329 SUPERFAMILY Homeodomain-like 22 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2094 Dere-ChrDere07 34983800 34985876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2094 4 324 G2-like Transcription Factor Family AT1G79430 54.545 2.37e-110 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere07g2094 Myb_DNA-binding 1.7e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g2094 07 34983800 34985876 Dere07g2094 07 34983800 34985876 ECH