Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2087 ATGTTAGAGTATTGGAGGGGAACCAAAAGTGCTAATAGGATCAAATCCCATTTTGATCCAAGTCAGCGCAAAGGTATTAGGCTATGCCCTCAACTTGATCGAGCTAACACTGGTTCCAACAAGAGACTCAAGAGCGATGTAAGTGCAAGTAATCTTGAACAGAATCCCACCAACGTAGAAGGACATGGTAAAGGATATTTATTGCCGACAGTGGATTTAGTTGGATATCAGTTTCAAAGTTATATTGAAGCAATATGGAAATGGATAATGGAAGATGAGGTGTCAGCAATTGGGGTATGGGGAATGGGAGGGGTGGGGAAAACAGCTTTAGTAACTCACATAAATAACAAGCTTTTGAAAGAAGCTAATGGTCACTTTGATCATGTTATCTGGATTACTGTGTCACAAGATGATAGCATTTTCCAATTGCAAAAAAGCATTGCAAAATCAATTGGTTTGGATATCTCGGATGAGTGCGATGTCAAAAGAATTGCTGGAAAATTATTACATGCATTCAAGCAAATAAATAAATGTGTTCTTATTTTGGATGAAGTTTGGGACAACATTTGGTTAGAGAATGTGGGATTTCCAGTTCCACATAAAGGGATTCAGTTAATTTTGACAACACGTTCATGGGAGGTGTGTCAAAGTATGAATTGCGAAAATAATATATTAAAAGTGGAACTTCTAGGTGTAAAAGACGGTTGCGATTTGTTCAAAAGGACCCTTGGAGTCCATCAAACACTATCTTGTGATGTGTCAGAAATAGCAAGGACTATAGTAAAGGAATGTGAAGGTTTGCCTCAAGCTATTGTTACAATTGCGAGAAGCATGAAGGGAAAAAACAGTGTCAGAGAATGGAATCACATGCTGAAAAGCCTTAAAAGCTTAGAAAATGGTCAATATGATATAGACAAATGGGTACTTCCAGTATTAAGGTCTAGCTATACTCACTTAAACAATAAATTCCAAGAATGCTTCTTGTATTGTACATTGTATACCAAATGTGAAGATAATGGTGTCCATACTATGGGTTTGACAAGAAGATTTGTCTATGAGGGATGGATAGATGGGATGAAACTATTAAAGACACAGTATGATGAATGCCGCAGCATATTGAATAAATTTTATTTGAATAGCTTGTTGTTGAAACGATTATGTGAAGAATGGCAAATGCACAATTTGGTTAGAGTTATGGCTGTGAAAGAGAATGATACAATTATGGCAAAAGCTAATATGAATCAGACAAATATACCAGATGACAGCAAATGGAAAGATCTACAAAAAGTTTTTCTGTCTAACAACAATATACAAAAAATTCCAGATGGTGCATCTCCTAGGTGTTCTCAACTTTCAACCTTGCTTCTAAATGATAATTACAACCTCGAATTCATCCCGGACAACTTTTTTATCAACATGCCTACTCTTAGAGTACTTGATCTATCTAAGACAAATATTAAACATTTACCCACATCCGTCTCCAACTTGGGGTGTCTTGTTGCATTATTGCTTTCATATTGTTTTTCATTAAGCCATGTGCCTTCGTTAGCAAAGCTGCGGCAGTTAATATCGTTGGACCTTTCCTATACTGCCATCACTGAAACTCGTCTTGACTTGGAACTGTTGACCAATCTTAGACGCCTGAATTTACAAGGAACAGAACAGTTGAAGATGTCAATGTCATCAATAATACCCAAATTGACCAATCTTCAATCTCTTTATCTTAACTGCAAACCAGAAATGGATGTCAGAGTGCCAGATTTACGGGGTTGTAAAGAGCTAGAAACTATTTTAGCCACCTTTTGTGATATCAATGTGTTCAATGCCTATGTTAGAAACATCCTGAACGGAGATCGTTTACTCAAGCAATATTTTTTTAATTTAACTCAGACAAATAAATATTTGGATGAAATTGATAATTTTATGGATGTGTCTGAGTTTTCAAGTGGCGAGTATTCTCAAAGAAAGGTAAGAATAGAGGAATTATCAGCACAGCTTCAAAATTTGGGGAGCTTTTACGTTGGCAATTGTGAGTCGATGGACGAAATAGTTTCAGAAAGAAGGGGACAAGAGGATGATTTTGATGACCATACTATTATTCTGCCCAAACTGGAATTTGTGCGCTTCAACAAGCTGCCAGAACTGAAATTCGTATATATAGGGACCATGCTCTGTCCTTCCATCATAGAATTCACAATAGAAAATTGTAAGCAACTAATAATGCTCCCCCAGACAGAGTCCCTCCAAGCCTTCTTAACCCAACAAGATTCCAAAGCAACTGTGATGCAACCAAGGACAATATTTTTGCCGTGTGACATTGAAGCCGATGTATTATCCTTTGGATTATCACTTCGGAATTGTTTATGA 2367 0.3692 MLEYWRGTKSANRIKSHFDPSQRKGIRLCPQLDRANTGSNKRLKSDVSASNLEQNPTNVEGHGKGYLLPTVDLVGYQFQSYIEAIWKWIMEDEVSAIGVWGMGGVGKTALVTHINNKLLKEANGHFDHVIWITVSQDDSIFQLQKSIAKSIGLDISDECDVKRIAGKLLHAFKQINKCVLILDEVWDNIWLENVGFPVPHKGIQLILTTRSWEVCQSMNCENNILKVELLGVKDGCDLFKRTLGVHQTLSCDVSEIARTIVKECEGLPQAIVTIARSMKGKNSVREWNHMLKSLKSLENGQYDIDKWVLPVLRSSYTHLNNKFQECFLYCTLYTKCEDNGVHTMGLTRRFVYEGWIDGMKLLKTQYDECRSILNKFYLNSLLLKRLCEEWQMHNLVRVMAVKENDTIMAKANMNQTNIPDDSKWKDLQKVFLSNNNIQKIPDGASPRCSQLSTLLLNDNYNLEFIPDNFFINMPTLRVLDLSKTNIKHLPTSVSNLGCLVALLLSYCFSLSHVPSLAKLRQLISLDLSYTAITETRLDLELLTNLRRLNLQGTEQLKMSMSSIIPKLTNLQSLYLNCKPEMDVRVPDLRGCKELETILATFCDINVFNAYVRNILNGDRLLKQYFFNLTQTNKYLDEIDNFMDVSEFSSGEYSQRKVRIEELSAQLQNLGSFYVGNCESMDEIVSERRGQEDDFDDHTIILPKLEFVRFNKLPELKFVYIGTMLCPSIIEFTIENCKQLIMLPQTESLQAFLTQQDSKATVMQPRTIFLPCDIEADVLSFGLSLRNCL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2087 788 ProSiteProfiles Leucine-rich repeat profile. 426 447 IPR001611 GO:0005515
Dere07g2087 788 PRINTS Disease resistance protein signature 172 186 - -
Dere07g2087 788 PRINTS Disease resistance protein signature 471 487 - -
Dere07g2087 788 PRINTS Disease resistance protein signature 264 278 - -
Dere07g2087 788 PRINTS Disease resistance protein signature 96 111 - -
Dere07g2087 788 Pfam NB-ARC domain 81 300 IPR002182 GO:0043531
Dere07g2087 788 Gene3D - 68 229 IPR027417 -
Dere07g2087 788 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 64 744 - -
Dere07g2087 788 MobiDBLite consensus disorder prediction 37 57 - -
Dere07g2087 788 SUPERFAMILY L domain-like 411 748 - -
Dere07g2087 788 Gene3D Ribonuclease Inhibitor 401 755 IPR032675 -
Dere07g2087 788 Gene3D - 230 320 IPR042197 -
Dere07g2087 788 Pfam Leucine rich repeat 450 507 IPR001611 GO:0005515
Dere07g2087 788 FunFam Probable disease resistance protein At1g61300 69 223 - -
Dere07g2087 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 330 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2087 Dere-ChrDere07 34883916 34887849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2087 93 595 WRKY Transcription Factor Family AT5G45050 21.503 3.08e-11 65.5