Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2086 ATGATGCAGCTTCCTGCGCGCCTGATAAAGTCTCTATCAGTTTCTTCTTTACCAGCTACACCCACGATTCAAGAGATTGGTTACAATCAACCCAAAGGTATTGCAAAGGTTGTACTGAAAAAGGGGAAGACACAACTCTTTAAGGATGGGAACCCAATGGTGTACAGTGGAGCTGTTGACAGAATAATTGGAAGACCACCTCCAAAGACTGGAGATATTGTGCTGGTGGCTGATGGGGCTGAGAAACCAATCGGGTGGGGCATGTACAATTCAGTTTCTATGTTCTGCGTCCGGCTCATGCAGTTTGAAGATGAAGCTACTAGGGATTCATCGTGTGCTTTGAATATCAAGAAATTGCTTGAAACAAGAATGGGTGCAGCTGTTGAATTGCGTAGAAGGTTGGGTCTTCCTTCGGCCCATACAAATGCATATCGTCTAATTAATAGTGAAGGAGATAGATTATCAGGATTGATCATTGACATCTTTGGAGATGTATGTGTAGTAGCATCATCTGCTGCTTGGGTTGAGAAGTACAAAGCAGAGATAGAGGCATGCATCAGTAAAATTGATGGCATCAATCACATAAATTGGCGACCATCTGTTGATATCTTAAAGGAAGAAGGCATGGATGCATCAGATTTGAAGGAAATTCATTCTTCTACTGGTCCTGAAAGGTCAAAGATTATTGAAAATGGAATTTCATATGCAATTTCACTGAGGGGCCAGAAGACAGGATTTTATGCAGATCAACGTGAGAACCGCCACTTTATATCGAGAATTTCTGATGGTCACAAGGTGCTTGATCTTTGCTGCTATAGTGGTGGTTTTGCCCTGAATGCAGTACGTGGAGGTGCTGTAAATGTCACTGGTGTTGATACATCACTGCCAGCTTTGGACCTTGCTAAAGAAAATGTTACACTTAATAATATGGATCCCGAAAGAATATCATTTTTGAGAGAAGATGCAGCTGTATTTATGAAGAGTGCTCTCTCAAGAAATGAGTCATGGGATATTGTCATCATTGATCCTCCTAAGCTGGCACCAACGAAAAAGGTTCTGCATAGTGCATCAGGCATGTACAGAAATTTGAACTCATTGGCTATGCAAATAACAAAAAGAGGTGGCCTTCTTATGACTTGTTCTTGCTCTGGAGCTGTGACCCAAAGTGGAGTATTTTTGCAAATTCTTCAGGGTGCAGCATCTATGGCAGGGAGAAAAGTCACTGTTCTAAGAGAGGCTGGAGCTGCTTGTGATCATCCTGTGGACCCATCTTACCCAGAAGGTGCATACCTGTCAAACATACTACTACGAGTATCATGA 1320 0.4227 MMQLPARLIKSLSVSSLPATPTIQEIGYNQPKGIAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVADGAEKPIGWGMYNSVSMFCVRLMQFEDEATRDSSCALNIKKLLETRMGAAVELRRRLGLPSAHTNAYRLINSEGDRLSGLIIDIFGDVCVVASSAAWVEKYKAEIEACISKIDGINHINWRPSVDILKEEGMDASDLKEIHSSTGPERSKIIENGISYAISLRGQKTGFYADQRENRHFISRISDGHKVLDLCCYSGGFALNAVRGGAVNVTGVDTSLPALDLAKENVTLNNMDPERISFLREDAAVFMKSALSRNESWDIVIIDPPKLAPTKKVLHSASGMYRNLNSLAMQITKRGGLLMTCSCSGAVTQSGVFLQILQGAASMAGRKVTVLREAGAACDHPVDPSYPEGAYLSNILLRVS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2086 439 Gene3D RNA methyltransferase domain (HRMD) like 116 218 - -
Dere07g2086 439 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 434 IPR029063 -
Dere07g2086 439 Gene3D Vaccinia Virus protein VP39 226 439 IPR029063 -
Dere07g2086 439 Gene3D PUA domain 34 105 IPR036974 GO:0003723
Dere07g2086 439 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 25 438 - -
Dere07g2086 439 Pfam S-adenosylmethionine-dependent methyltransferase 219 399 IPR019614 GO:0008168
Dere07g2086 439 CDD AdoMet_MTases 265 380 - -
Dere07g2086 439 CDD RlmI_M_like 119 213 - -
Dere07g2086 439 Pfam PUA-like domain 37 101 IPR041532 GO:0003723
Dere07g2086 439 CDD PUA_RlmI 35 105 IPR041532 GO:0003723
Dere07g2086 439 SUPERFAMILY PUA domain-like 36 104 IPR015947 -
Dere07g2086 439 SMART pua_5 35 129 IPR002478 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g2086 07 34873740 34882904 Dere07g2086 07 34873740 34882904 ECH