Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2078 ATGTTATGTGCAGGTGAAGTAATAATGGAGAGACCAACTGGTGGAAGGCCAAAGGCTGTTGACATATGGGAACACGTTACAGAATTGGAAGGGAAACGAGTAAAGTGCAAACACTGTGGACTTGTATTTGCAGCAAGTGCAAATAGGATCAAATCCCATATTTATCAAATTAAAGGTCAAGGTATTCGAGTATGCAATGGCTATCCTCCATCTAACGATATTGGTTCCAACAAGAGAGCCAACAGCGATCTAGAAGAGAAGCTTATTGATTCAAAAGCAATGTGGGAAGGGATAATGGCTCACTCACATTCCCAATCGCAACAAATCAACACGAAAACTCGGCATCAGGAGAGGATCCAAGTTGGCCCTTTCCTTGTTTCCAAGGTGGTGAATGCACGTGACTTGCAGTTAATACAATACGTGTTTGGTTTGCCACTAGACAAACGGGTTTTTTCTTCCTCTTGTTCTTTTTTGAATCAATCTGAATTTGCAACACTTCAACCTGAGGCTCTATTGGATTCATTGTTTGACAGTGATGATGAAAGGTTTGATTTGGCTTTAAAGTTGCTGAAGAGTGACCTAAACAAGGAAAGAAAAACACTGTATGATAAACCAACCAAAAGACACAAGGCACAGGGTGGAGATGAGGAAGATTCAGATTTATCTGGAATTAAAAGAAAGGCATATATAGAATTGGATGTTTCTGATAGAAGAGTCAGCAGGAGCAATGTTGGTTTGGAAAAAGGAAATGCTAAAGATTATATATTGCCGAGAACAGATTTAGTTGGATTTGATTTTGGATATGACATTATTCGTATTTGGAGTTGGTTAATGAATGATGAGGTGGGAGTTATTGGAGTATGGGGAATGGGAGGGGTGGGAAAAACAGCTTTGGTCACTCATATCCATAATAAGCTTTTAGAAGAAGATGATGCTGACTTTGATCATGTCATTTGGGTCACTGTATCACAACATAATAGCATCTCACAGCTGCAAAAAGTCATTGCTAAATCGATTGATTTGGACATATCAGATGAGTATGAGGTTAAAAGAATTGCTGGAAAGTTATTGCATGCATTCAAACAAATGAATAAGTGTGTTCTCATATTAGATGATGTTTGGGACCATATTTTTTTGGAGAAGGTAGGATTTCCTATTTATCGTGATGGGATTAAACTGATTTTGACAACTTGTTTGCGAGAGGTGTGTCAGAGTATGGATTGCAAGAATAATATAATAGAAGTGAAACCTCTTGATGTGGCAGATGGTTGGGATTTATTTAAAAGGACACTTGGAGTCCATCCGACACTATCTCTTGAGATGGAGAATATAGGAAGGAAAATGATAAGGTTATGTGATGGTTTGCCTCTTGCTATTGTTACAATTGCAAGAAGCATGAAGGGAAAAGTAGACGTCACAGAATGGAATCACATGTTGGAAAGCCTTGAAAACTTAGAGAAAGGTCAAGATGATATGGACAAGTGGGTATTTCCAGTCTTAAGATCTAACTATGCTCACTTAAATAATAAACTTCAAGAATGCTTCTTATATTATGTATTAGGTGCCAGAGATGAAGATGGTAATGTGGATCTTAATGACTTGACAAAACAGTTAGTCTATGAGGGATTGATAGATGGGAAGAAGAGGTTAATGGCGCAATATTATGAATGTAAGATCATGTTGAACAAAATTTATTTGAGCAGCTTGTTGGAAAATTTTGGTTTGGATGAATGGCACGTACACAAGTTGGTTAAAGTCATGGCTGTAAAAGAGGCTGATAAAATTATGGCAAAAGCTTATATGCAATTGACGGAAATACCAGAAAGTAATGATTGGAAAGAAGATCTACAAAAAGTCATTTTGTCTGGAAATGATATACAAGAAATTTTAGATGGCACATCTCCTGATTGTTCTCAACTTTCGACTTTACTTTTAAATCAAAATAGAAGCCTCAATTCGATTCCAAATGATTTTTTCATCAAAATGCCCACTCTTAAAGTACTTAATCTGTCTCAAACTAAGATTAGATGCTTGCCCACCTCCATCTCCAACCTAGTGTGCCTTACTGCATTATTGCTTTCGCGATGCGACTTATTGAGCGACATGCCATCATTAGCAAAGCTGCGAAAGTTAATATCTTTGGACCTTTCCGAAACTGCCATCGCCAAAGCACCTTCAGGCTTAGACTTGTTGATCAATCTAAGACATCTTAATTTAGAAGGAACAGAGCATTTAGAGATGTCAACATCATCAGTAATACCCAAATTAACCAATCTTCAATGCCTTCGTCTTAACGGTATACCAAAATCAATGGATGTCAGTGCACAAGATCTGCAAGGTTTGAAAGAGTTAGAAGTTGTTGTAACCAACTTCTGTGACATCAAAGAGTTCAACGCCTATGTGATAAGCTTGCATGACAGAGGTTATATGCTCGAAAAATATTGTTTTACTGTAAATAAGATTGAGTCAAGTAATTTCATTAGTTTATTTGATTTTTTAAGTGGTGTGGATTCCTTCAAAATGGTAACTTTTGAAGGAACAGAATTGAGAAATACAGCAGCGGTACTCCCAGAAGACATCAAAGAGCTGTGGGTAGACGATTGTCACCTATCGACGCAAAATCTCTGCCATGCTTTATCACTTTGGGGAAATGACGGCCTATGCAAAATTGAAAGATTTAATGTTATAAGTTGCGATAAGATGGTGGGCTTGTGTTGTTTCACTCCCAATTGCTCCTTTTGCTCCTCTGTCCAACTCGTTGGCCGTCTTAGCCTTTGTAATTTGAAAGACTTACAATATATAGTATATCCACTTGCTCCACCTTGGCCTCAAGGCCCCCGATTTTCTCATCTCAAAGAGCTCAATATTGATGGATGCAATAGCATGAAGACTCTGCTAACGTCAGAATTCTCTGAACAGCTCCAAAACTTGCTGTACCTTTCCGTGAGTGATTGTCAGACGATGAAGGAAATAGTTTCAGACAGAAGAAGAGACGAGGATTCTTTTGGAACTGTCAGTCTTCCCAAAGTACAAACCGTGCTGTTGAGGAACCTACCGGAATTGAATTCCGTAAACACAGGGGACATGCTCTGTCCTTCTCTCCTAAGTTTTCATAGCGAAAATTGTGACAAACTAAGACCCCCTCGTATAAAGAAGACCCAAGATGGAGATTATCTTCAGATAACAGGGACCGTAGAAGGATACTCTTGGAGCAGTTGGTTAGACAGTTCCATATTTCCTATAACATTTAGCTACCTTTGA 3261 0.3833 MLCAGEVIMERPTGGRPKAVDIWEHVTELEGKRVKCKHCGLVFAASANRIKSHIYQIKGQGIRVCNGYPPSNDIGSNKRANSDLEEKLIDSKAMWEGIMAHSHSQSQQINTKTRHQERIQVGPFLVSKVVNARDLQLIQYVFGLPLDKRVFSSSCSFLNQSEFATLQPEALLDSLFDSDDERFDLALKLLKSDLNKERKTLYDKPTKRHKAQGGDEEDSDLSGIKRKAYIELDVSDRRVSRSNVGLEKGNAKDYILPRTDLVGFDFGYDIIRIWSWLMNDEVGVIGVWGMGGVGKTALVTHIHNKLLEEDDADFDHVIWVTVSQHNSISQLQKVIAKSIDLDISDEYEVKRIAGKLLHAFKQMNKCVLILDDVWDHIFLEKVGFPIYRDGIKLILTTCLREVCQSMDCKNNIIEVKPLDVADGWDLFKRTLGVHPTLSLEMENIGRKMIRLCDGLPLAIVTIARSMKGKVDVTEWNHMLESLENLEKGQDDMDKWVFPVLRSNYAHLNNKLQECFLYYVLGARDEDGNVDLNDLTKQLVYEGLIDGKKRLMAQYYECKIMLNKIYLSSLLENFGLDEWHVHKLVKVMAVKEADKIMAKAYMQLTEIPESNDWKEDLQKVILSGNDIQEILDGTSPDCSQLSTLLLNQNRSLNSIPNDFFIKMPTLKVLNLSQTKIRCLPTSISNLVCLTALLLSRCDLLSDMPSLAKLRKLISLDLSETAIAKAPSGLDLLINLRHLNLEGTEHLEMSTSSVIPKLTNLQCLRLNGIPKSMDVSAQDLQGLKELEVVVTNFCDIKEFNAYVISLHDRGYMLEKYCFTVNKIESSNFISLFDFLSGVDSFKMVTFEGTELRNTAAVLPEDIKELWVDDCHLSTQNLCHALSLWGNDGLCKIERFNVISCDKMVGLCCFTPNCSFCSSVQLVGRLSLCNLKDLQYIVYPLAPPWPQGPRFSHLKELNIDGCNSMKTLLTSEFSEQLQNLLYLSVSDCQTMKEIVSDRRRDEDSFGTVSLPKVQTVLLRNLPELNSVNTGDMLCPSLLSFHSENCDKLRPPRIKKTQDGDYLQITGTVEGYSWSSWLDSSIFPITFSYL 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2078 1086 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 517 IPR027417 -
Dere07g2078 1086 SUPERFAMILY L domain-like 600 799 - -
Dere07g2078 1086 ProSiteProfiles Zinc finger BED-type profile. 17 72 IPR003656 GO:0003677
Dere07g2078 1086 MobiDBLite consensus disorder prediction 201 220 - -
Dere07g2078 1086 Pfam Leucine rich repeat 639 698 IPR001611 GO:0005515
Dere07g2078 1086 Gene3D - 255 417 IPR027417 -
Dere07g2078 1086 PRINTS Disease resistance protein signature 284 299 - -
Dere07g2078 1086 PRINTS Disease resistance protein signature 360 374 - -
Dere07g2078 1086 PRINTS Disease resistance protein signature 706 722 - -
Dere07g2078 1086 PRINTS Disease resistance protein signature 452 466 - -
Dere07g2078 1086 Pfam NB-ARC domain 270 501 IPR002182 GO:0043531
Dere07g2078 1086 FunFam Probable disease resistance protein At1g61300 253 411 - -
Dere07g2078 1086 Gene3D Ribonuclease Inhibitor 685 1046 IPR032675 -
Dere07g2078 1086 Gene3D Ribonuclease Inhibitor 587 684 IPR032675 -
Dere07g2078 1086 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 270 1046 - -
Dere07g2078 1086 Gene3D - 418 507 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2078 Dere-ChrDere07 34750918 34756722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2078 281 516 WRKY Transcription Factor Family AT5G45050 23.077 3.41e-07 52.8