Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2075 ATGAATAGACCAGCTAGGGGGAGGCCAAAGGCTGTTGACATATGGGAACATGTTATAGAATTGCAGGGGAAACGAGTAAAGTGCAAATATTGTGGACTTATATTTGCAGCAAGTGCTAATAGGATCAAATCCCATATTTATCAAATTAAAGGTAAAGGCATTCGAGTATGCAATGGCTTTCCTCCCCCTGACCATAGTGGTTCCAACAAAAGAGTCAACGACGATCTAGAAGAGAAGCTTATTAATTCTCAAGGTTTATCTGCATTAGAGAGGCCAAGAGATTGCAACAAACTCAATGAGACAATGCTTGATTGTTACATGTCCCCCAAAGCAATGTGGGAAGGGATAATGGCTCACTCACATTCACAATCACAACAAATCAACACGAAAACTCAGCATCAGGAGAGGATCCAAGTTGGCCCTTTCCTTGTTTCTAAGATGGTGAATCCACGTGACTTGCAATTAATACAATATGTGTTTGGTTTGCCATTAAATGAGCGGGTTTTTTCTTCCTCTTGTTCTTTTTTGAATCAATCTGAATTTGCAACACTTAAACCTGAGGCTCTGTTGGATTCATTGTTTGACAGTGATGAAGAAAGGTTCGATTTGGCTTTAAAGTTGCTGAAGAGTGACCTAAACAAGGAAAGAGAAACACTGTATGACAAAGCAACCAAAAGACACAAGGCACAGGATGGAGATGAGGAAGATTCAGATTTATCTGGAATTAAAAGAACGGCATACATAGAATTGGATGATTCCGATAGAAGAGTCAGGAGGAGCAATGTTGGTTTGGAAAAAGGAAATGCTAAAGATTATATATTGCTGACAACAGATTTAGTTGGATTTGATTTTGAAGAAGACATTATTTGTATTTGGAGTTGGTTAATGAAAGATGAGGTGGGAGTTATTGGAGTATGGGGCATGGGAGGGGTGGGAAAAACAGCTTTGGTCACTCATATCCATAATAAGCTTTTAGAAAAAGATGATGCTGACTTTGATCATGTCATTTGGGTCACTGTATCACAACAAAATAGCATCTCACAGCTGCAAAAAGTCATTGCTAAATCGATTAATTTGGACATATCAGATGAGTATGAGGTTAAAAGAATTGCTGGAAAGTTATTGCATGCATTCAAACAAATGAATAAGTGTGTTCTCGTATTAGATGATGTTTGGGAACATATATTTTTAGAGGAGGTAGGATTTCCTATTTATAGTGATGGGATTAAACTAATTTTGACAACTCGTTTGCAAGAAGTGTGTCAGAGTATGGATTGCAAGAATAATATAATAGTAGTGAAACCTCTTGATGTGGCAGATGGTTGGGATTTGTTTAAAAGGACACTTGGAGTCCATCCGACACTATCTCCTGAGATGGAGAATATAGGAAGGACTATGATGGACAATTGTGGAGGTTTGCCTCTTGCTATTGTTACAATTGCAAGAAGCATGAAGGGAAAAGTAGACGTCATAGAATGGAATCACATGTTAGAAAGCCTTGAAAACTTAGAGAAAGGTCAGGATGATATGGACAAGCGGGTATTTCCAATCTTAAGATCTAGTTATGCTCACTTAAATAATAAACTCCAAGAATGCTTCTTATCTTTTGTGGATCTTAACGACTTGACAAAACAGTTAGTCTATGAGGGATTGATAGATTGGAAGAAGAGGTTAATGGCACAATATCATGAATTTCAGAGCATGTTAAACAAAATTTATTTGAGCAGCTTGTTAGAAAACGATGATTTTGGAGAATGGCAAGTGCACAAGTTGGTTAATGTCATGGCTGTAAAAGAGGCTGATAAAATTATGGCAAAAACTTATATGAAATTAACAGAAATACTAGAAGATGATAATTACAACCTCAATTTGATTCCAGATGATTTTTTCATCAAAATGCCCACTCTTAAAGTACTTAATCTGTCTCAAACTGAGATTAGATGCTTGCCCACCTCCATCTCCAACTTAGTGTGCCTTATTGCATTATTGCTTTCTGGGTGCCACTTATTGAGCGACATGCCATCATTAGCGAAGCTGAGAAAGTTAATGTATTTGGACCTTTCCGAAACTGCCATCGCCAAAGCACCTTCAGGCTTAGACTTGTTGATCAATCTAAGACATCTTAATTTAGAAGGAACAGATCATTTAAAGATGTCAACATCATCAGTTGTACCCAAATTAACCAATCTTCAATGCCTTCGTCTTAATGGTATACCAAAATCAATGGATGTCAGTGCACAAGATCTGCAAGGTTTGAAAGAGTTAGAAGTTGTTGTAACCAAATTCTGTGACATCATAGAGTTCAACGCCTATGTGACAAGCTTGCATGAGAGAGGTTATATGCTCGAAAATTATTGTTTTACTGTTAATAAGACTGAGTCATGTGATTTCACTATGGTACGGGAGTTTTCAAGTGATGAGGATTCCCTCAAAATGGTAAATTTTGAAGGAACAGAATTGGGAAATATAGCAGCGGAACTCCCAGAAGACATCAAAGTGCTGTGGGTAAAGGAGTGTCACATATCGAAGCAAAGTCTCTGCCAAGCTTTATCACCTTGCGGAAATGACGGCCCATGCGAAATTGAAAGCTTTCGTGTTAGCAGGTGCGATGCGATGGTGTGCTTGTGTTGTTTCACTCCCAGTTGCTCCTTTTGCTCCTCTGTCCAACTCGTTGGGCGTCTTAGCCTTTGTAACTTGAAAGACTTGCAATATATAGTATATCCACTTGCTCCACCTTGGCATGAAGGCCCCCAATTTTCTCATCTCGAAGTGCTCATTATTGAAGGATGCAATAGCATGATGACTCTGCTAACGTCAGAATTCTCTGAACAGCTCCGAAACTTGCGGACCCTTTCCGTGAGTGATTGTCAGTCGATGAAGGAAATAGTAAGAGACGAGGATTCTTTTGGAACTGTCAGTCTTCCCAAAGTACAAAAGGTGCAGTTGATGAACCTACCGGAATTGAATTCCGTAAACACAGGGGACATGCTCGGTCCTTCTCTCGAAAGTTTTCATAGCGAATATTGTAACAAACTAAGACCCCCTCATATAAAGAAGACCCAAGATGGAGATTATCTTCAGATAACAAAGACCGTAGAAGGATACTCTTGGAGCAGTCGGAGTTCCATATTTCCTACAACATTTAGCTCCCTTTTTTAA 3159 0.3884 MNRPARGRPKAVDIWEHVIELQGKRVKCKYCGLIFAASANRIKSHIYQIKGKGIRVCNGFPPPDHSGSNKRVNDDLEEKLINSQGLSALERPRDCNKLNETMLDCYMSPKAMWEGIMAHSHSQSQQINTKTQHQERIQVGPFLVSKMVNPRDLQLIQYVFGLPLNERVFSSSCSFLNQSEFATLKPEALLDSLFDSDEERFDLALKLLKSDLNKERETLYDKATKRHKAQDGDEEDSDLSGIKRTAYIELDDSDRRVRRSNVGLEKGNAKDYILLTTDLVGFDFEEDIICIWSWLMKDEVGVIGVWGMGGVGKTALVTHIHNKLLEKDDADFDHVIWVTVSQQNSISQLQKVIAKSINLDISDEYEVKRIAGKLLHAFKQMNKCVLVLDDVWEHIFLEEVGFPIYSDGIKLILTTRLQEVCQSMDCKNNIIVVKPLDVADGWDLFKRTLGVHPTLSPEMENIGRTMMDNCGGLPLAIVTIARSMKGKVDVIEWNHMLESLENLEKGQDDMDKRVFPILRSSYAHLNNKLQECFLSFVDLNDLTKQLVYEGLIDWKKRLMAQYHEFQSMLNKIYLSSLLENDDFGEWQVHKLVNVMAVKEADKIMAKTYMKLTEILEDDNYNLNLIPDDFFIKMPTLKVLNLSQTEIRCLPTSISNLVCLIALLLSGCHLLSDMPSLAKLRKLMYLDLSETAIAKAPSGLDLLINLRHLNLEGTDHLKMSTSSVVPKLTNLQCLRLNGIPKSMDVSAQDLQGLKELEVVVTKFCDIIEFNAYVTSLHERGYMLENYCFTVNKTESCDFTMVREFSSDEDSLKMVNFEGTELGNIAAELPEDIKVLWVKECHISKQSLCQALSPCGNDGPCEIESFRVSRCDAMVCLCCFTPSCSFCSSVQLVGRLSLCNLKDLQYIVYPLAPPWHEGPQFSHLEVLIIEGCNSMMTLLTSEFSEQLRNLRTLSVSDCQSMKEIVRDEDSFGTVSLPKVQKVQLMNLPELNSVNTGDMLGPSLESFHSEYCNKLRPPHIKKTQDGDYLQITKTVEGYSWSSRSSIFPTTFSSLF 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2075 1052 Pfam NB-ARC domain 290 522 IPR002182 GO:0043531
Dere07g2075 1052 ProSiteProfiles Zinc finger BED-type profile. 9 64 IPR003656 GO:0003677
Dere07g2075 1052 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 214 1013 - -
Dere07g2075 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 276 534 IPR027417 -
Dere07g2075 1052 Gene3D - 279 433 IPR027417 -
Dere07g2075 1052 FunFam Probable disease resistance protein At1g61300 269 429 - -
Dere07g2075 1052 Gene3D Ribonuclease Inhibitor 599 1018 IPR032675 -
Dere07g2075 1052 Pfam Leucine rich repeat 618 669 IPR001611 GO:0005515
Dere07g2075 1052 PRINTS Disease resistance protein signature 943 959 - -
Dere07g2075 1052 PRINTS Disease resistance protein signature 378 392 - -
Dere07g2075 1052 PRINTS Disease resistance protein signature 302 317 - -
Dere07g2075 1052 PRINTS Disease resistance protein signature 470 484 - -
Dere07g2075 1052 FunFam Probable disease resistance protein At5g66910 436 521 - -
Dere07g2075 1052 SUPERFAMILY L domain-like 610 1012 - -
Dere07g2075 1052 Gene3D - 436 526 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2075 Dere-ChrDere07 34651652 34657299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2075 278 737 WRKY Transcription Factor Family AT4G12020 21.961 1.25e-06 50.8