Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2053 ATGATGCGCTTCAATGAATGGATAGCTCTTGGTAACTCAAAGCCTGAGCAGTTATCAGGACCGCTGCCATTTTTGAGTTCAGTAGTGAATTCTCCTCTTCCTGATAGAAAATTTCTTTCATTTATTAAGATGAACAGAGAATTGTCGGAGGCAGATCAGATTGCTCACAGTTGTGACAGTTCAGCAGCTGGTTCACCAAGTCATCTCAAAAAGGCAAACCAAGCTGCAATAAAGTTAACAAGTAGTCAAGCATCTGAACCCCAGAAACTAGAACTACCCAGCAAGAAGATGATGCCTGCAAATTCTGATCCCCAAGCTACGTCACCTGCGCTTACCACAGGAATCTCGAAGGGTGTTCCTTCACCTTCAAGGACCACCAACCAAGGATATGGCAGTGGCAATAGCTCTCGTAGTGACAGTTTAGATAGCACAAGTGCGCCCATTAAGCCACATACTGGTGGTGATGTAAGGTGGGATGCCATTAACACGGTTTCTAGAGGAGGCCCTCTTGATCTTAGCCATTTTCGGCTTCTCAAGCGACTTGGGTATGGGGATATTGGGAGCGTGTATCTTGTGGAACTTAGACAAACCAAGACTTACTTTGCCATGAAGGTGATGGACAAGGCATCTCTTATAAGCAGGAATAAGCTACTAAGAGCACAGACGGAGAAGGAGATTCTTGAACTCCTTGACCACCCTTTCCTGCCCACTTTGTATTCCTACTTTGAAACTGATAAATTCTACTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGTATTTTACGGAAGAAGCTGCACGGTTCTATGCCTCAGAGATTTTGTTAGCTCTTGAGTACCTGCACATGCTAGGCATCGTGTACAGAGACTTGAAGCCAGAGAATGTCCTAGTCAGAGACGAGGGCCATATCATGCTCTCAGATTTTGATCTATCCCTTCGCTGCTCGGTCAATCCGACCCTCGTCAAGTCTTCATCTGCCCATGTAAGTAGTAGCAGTAGCACTAGTGGTTCAGGGGGTGTTTTGGATGAACAGCAATCAGTCCAGGGTTGCATACAGCCATCAACTTTCTTCCCACGCATTTTACCGTCAAAAAAGAACCGAAAATCGAAGTCAGATTTCGGCCTCTTAAATGGAGGTACTGCCCTTCCTGAACTCATGGCAGAGCCTACAAACGTGAGGTCGATGTCCTTTGTAGGGACACATGAATATCTGGCACCTGAAATCATCCGGGGCGAAGGTCATGGTAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTTTTACATGGGACAACACCCTTTAAAGGTGCAGGAAATAGAGCCACACTCTTTAATGTTGTAGGGCAGCCATTAAGGTTCCCAGATACTCCCCAGGTGAGTTCTGCAGCTAAAGACCTTATCAAAGGACTGCTGGTAAAGGAACCTCCGAAGCGAATCGCATATATAAGGGGTGCCACAGAGATAAAACAGCACCCGTTTTTTGAGGGAGTGAACTGGGCTCTAGTTAGAAGTGCCACGCCTCCTCATATACCAGATCTTGTAGATTTTTCCAAGTTCGCTAGCAAAGGATCAGCAGCACCAGCAGACAAAAAGATGACAGATATTGCAAAAGATAAAAGCAGCGCAAATGGTCCCACTGATTCTTCCTATGTAGAGTTTGAGTACTTTTAA 1713 0.4542 MMRFNEWIALGNSKPEQLSGPLPFLSSVVNSPLPDRKFLSFIKMNRELSEADQIAHSCDSSAAGSPSHLKKANQAAIKLTSSQASEPQKLELPSKKMMPANSDPQATSPALTTGISKGVPSPSRTTNQGYGSGNSSRSDSLDSTSAPIKPHTGGDVRWDAINTVSRGGPLDLSHFRLLKRLGYGDIGSVYLVELRQTKTYFAMKVMDKASLISRNKLLRAQTEKEILELLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKYFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHVSSSSSTSGSGGVLDEQQSVQGCIQPSTFFPRILPSKKNRKSKSDFGLLNGGTALPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPDTPQVSSAAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGVNWALVRSATPPHIPDLVDFSKFASKGSAAPADKKMTDIAKDKSSANGPTDSSYVEFEYF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2053 570 ProSiteProfiles Protein kinase domain profile. 175 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2053 570 MobiDBLite consensus disorder prediction 100 147 - -
Dere07g2053 570 Gene3D Transferase(Phosphotransferase) domain 1 259 329 - -
Dere07g2053 570 PANTHER FLIPPASE KINASE 1-RELATED 76 531 - -
Dere07g2053 570 Gene3D Phosphorylase Kinase; domain 1 173 258 - -
Dere07g2053 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Dere07g2053 570 Gene3D Transferase(Phosphotransferase) domain 1 383 526 - -
Dere07g2053 570 Pfam Protein kinase domain 383 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2053 570 Pfam Protein kinase domain 176 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2053 570 MobiDBLite consensus disorder prediction 58 89 - -
Dere07g2053 570 SMART serkin_6 175 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2053 570 MobiDBLite consensus disorder prediction 58 152 - -
Dere07g2053 570 CDD STKc_phototropin_like 173 529 - -
Dere07g2053 570 FunFam Serine/threonine-protein kinase AGC1-5 173 258 - -
Dere07g2053 570 FunFam serine/threonine-protein kinase D6PK-like 259 326 - -
Dere07g2053 570 SUPERFAMILY Protein kinase-like (PK-like) 172 530 IPR011009 -
Dere07g2053 570 FunFam Serine/threonine-protein kinase AGC1-7 401 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2053 Dere-ChrDere07 34195586 34200922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2053 83 570 AGC Kinase Gene Family AT3G12690 68.347 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere07g2053 Pkinase 1.1e-37 CL0016