Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2046 ATGCCAGGAAGTGGACAACTGACGGTTCCTCCAGGTTTTCGGTTCCACCCTACTGATGAAGAGCTTCTTTACTATTACCTGAGGAAGAAAGTCTCTTATGAAGCCATTGATCTTGACGTCATCAGAGAAGTAGATCTCAACAAACTTGAGCCCTGGGACCTCAAAGAGAAATGTAGGATCGGATCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAGTACCCTACAGGAACAAGGACAAATAGGGCAACTACAGTAGGGTTTTGGAAAGCAACGGGGAGGGACAAGGCCATATACCTCACAAACTCCAAGAGGATTGGCATGAGAAAAACCCTCGTCTTCTACACTGGCCGTGCTCCTCACGGCCAAAAGACCGACTGGATCATGCATGAGTATCGCCTCAATGAAGGCGACGCTGAGGTTCAGGAAGATGGGTGGGTAGTGTGCAGGGTTTTCAAGAAGAACCTAAATAGAGGTTTCCTACCAGCAGAAGTGGAAGTGGAAGAACACATAGCAACTCAAATGAGAACAATAAGTGGGTCGAGCCAGCAAGTACGAGAACCAAAACATCATCATCATCATCTTCATATGCAAGCACTATATGATCAGAATTATAGCTTCGATGGTTCAATGCACCTACCACAACTGTTCAATCCTGAATCTGCAGTACTAGCAGCAGCAGCACCAACTTCCTTTGCTTCATCGTCATCATCTTCTTCCATGGACGACGTCGTTGAGTGCTCTCAGAACTTGTTGAGGCTCACAGGCGCAAGTGGTGGTTGTGGACTTAATCTTAACATCTATAATAATGGCGATCACTGGTCGTTCTTGGACAAGCTTCTTGCTTCACACCCTCAGAGATTCCCCGCACATGATCATCCTGCTGTGGTGGGTGCCTCAACCCAGAAATTCCCAGTTCATTACCTTTGTGAGACACGTGACATCATGAAGTTCTCTAAGTAG 975 0.4667 MPGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYLTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLNEGDAEVQEDGWVVCRVFKKNLNRGFLPAEVEVEEHIATQMRTISGSSQQVREPKHHHHHLHMQALYDQNYSFDGSMHLPQLFNPESAVLAAAAPTSFASSSSSSSMDDVVECSQNLLRLTGASGGCGLNLNIYNNGDHWSFLDKLLASHPQRFPAHDHPAVVGASTQKFPVHYLCETRDIMKFSK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2046 324 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Dere07g2046 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 225 - -
Dere07g2046 324 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Dere07g2046 324 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Dere07g2046 324 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Dere07g2046 324 FunFam NAC domain-containing protein 18 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2046 Dere-ChrDere07 34095967 34098028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2046 1 324 NAC Transcription Factor Family AT1G79580 52.406 1.41e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g2046 NAM 4.6e-38 No_clan