Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2038 ATGGATAGACCAGGTGGTGGAAGGCCAAAGGCATTAGACATATGGAAACACGTTACAGAAATGGAGGGGAAACGAGTAAAGTGCAAATATTGTGGACTTGTGTTTGCAGCAAGTGCTAATAGGGTCAAATCACATGTCTATCAAATTCAAGGCAATGGAATTCGAGTTCATCACAAAATTGGTTTCTCAACGAGGCCAAGAGATTATAACAAATTCAATAACACAATGCTTGATTGTTACATGTCCCCTAAAACAATGTGGGAAGGGATAATGGCTCTCCCACATGCACAACAAATCAACATAGAGACTAAGCATCACGAAAGGTTCCAGTTTGGCCCTTTCTTTGTCTCCAATATGCTGAATGCACGTGACAAGCAGTTAATACAATATGTGTTTGATTTGCAATTAGACGAGTGATATGATTGTGGTATATTTGTTATTAACTATATGCAACAGTCAGCTAATTTTGTGCGAAGAAATCCTTTGTTTCAGTATCAAACTGATGAAGAAAGGTTGGATATAGCATTAAAGTTGCTGAAGAGTGACCTAAACAAGGAAAGAGAAATACTATATTGCAAAGCAGAAGAAAGACACAATGCACAAGGTGGAAAAGAACAAAATTCAGATTTTCGTGGAATTAAAAGAAAGCACGTTGGTACTTGCATGACATTAGCTGAAGATGTTCGAGGAGAGGCATATATGGAATTGGATGATTGTCATAAAAAAGTAAGGAGCACTGTAGGTTTGGAAAAAGGAAACAAAATAATTAGTAGATCAGGAGGAAGGCCAAAGGCTGATGTCTGGAAACATGTAACCGAAATGGAGGGCAACCAAGTTGAGTGCAACTATTGTGGATTCATATTTGCCAAAAGTGCTAATAGGATCAAATCACATTTTGATCCAATTAAGCGCACAGGTTTGAAGAGAACAGGCAAAAGTTGCAGATTAAGCAACTTGCATTCCGATGTTCAGCGCGGAAATATCACACTAGAAGAACAGTTGTTGATTCTTGAGCTCCACTCTCGGTGGAGCAATAGATGGTCGAAAATTGCGCACCACTTACCAGGAAGAACAGAAAATGAGATAAAAAATTATTGGAGGACGAAAGTGATGAAGCAGGCAGAGCAGCTCAAGTGTGATGTTAACAGTAAGCAGTTCAAAGACGCCATGCGTGACCTGTGGATGCCCTGCTTGCTGGAACGGATACGGGCAGATGCACCCGAATATGACCCGACCTGCCAACCCACCACGTCTGCGTCCAGTTCAGCAACCGAGTGGTTCGACATGACTGACTTTTTTGCCTGGACTAATTTGGACCACGGCGGATTTTCGCCAATAAACGAGAGGGAATTTTACCCATGGGTTGTAGAATCGGACTTGGAGCAGGCGAATGCCTTGGATAGTGACCGGGGGGGGATTGAGAATGACCGCCTCTGGCCCTACGATATTTAG 1452 0.4201 MDRPGGGRPKALDIWKHVTEMEGKRVKCKYCGLVFAASANRVKSHVYQIQGNGIRVHHKIGFSTRPRDYNKFNNTMLDCYMSPKTMWEGIMALPHAQQINIETKHHERFQFGPFFVSNMLNARDKQLIQYVFDLQLDEXYDCGIFVINYMQQSANFVRRNPLFQYQTDEERLDIALKLLKSDLNKEREILYCKAEERHNAQGGKEQNSDFRGIKRKHVGTCMTLAEDVRGEAYMELDDCHKKVRSTVGLEKGNKIISRSGGRPKADVWKHVTEMEGNQVECNYCGFIFAKSANRIKSHFDPIKRTGLKRTGKSCRLSNLHSDVQRGNITLEEQLLILELHSRWSNRWSKIAHHLPGRTENEIKNYWRTKVMKQAEQLKCDVNSKQFKDAMRDLWMPCLLERIRADAPEYDPTCQPTTSASSSATEWFDMTDFFAWTNLDHGGFSPINEREFYPWVVESDLEQANALDSDRGGIENDRLWPYDI 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2038 483 FunFam MYB transcription factor 329 392 - -
Dere07g2038 483 Gene3D - 329 392 - -
Dere07g2038 483 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 303 417 IPR044676 GO:0003700|GO:0006355|GO:0043565
Dere07g2038 483 ProSiteProfiles Zinc finger BED-type profile. 9 64 IPR003656 GO:0003677
Dere07g2038 483 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 320 374 IPR017930 -
Dere07g2038 483 Pfam Myb-like DNA-binding domain 325 368 IPR001005 -
Dere07g2038 483 SUPERFAMILY Homeodomain-like 308 372 IPR009057 -
Dere07g2038 483 CDD SANT 345 368 IPR001005 -
Dere07g2038 483 ProSiteProfiles Zinc finger BED-type profile. 262 304 IPR003656 GO:0003677
Dere07g2038 483 ProSiteProfiles Myb-like domain profile. 320 370 IPR001005 -
Dere07g2038 483 SMART sant 324 372 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2038 Dere-ChrDere07 33989624 33995681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2038 303 475 MYB Transcription Factor Family AT2G47190 47.514 1.24e-43 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere07g2038 Myb_DNA-binding 3.9e-12 CL0123