Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2009 ATGGAAAAGCACCAAAACCACCACCACCATAACCCCGACAATAAGAAGCAGCAGCAGCAGCACCACCACCACCGCCAAAACCACCACCAGACTTGGGGTACGTGGGAGGAGCTTCTCTTGGGCTACGCGGTCAACCGCCATGGCTTCAAGGACTGGGACGCCGTCGCTATGGAGATCCAGAACCGCACCAACCTTCCTCACCTCCTCACCACCGCCCGCAACTGCGAGCAGAAATTCCTCGATCTCAAACGCCGATTCACCGCTCAATGCAACGACGCCGTTCCGGAGCCGACGGAGAACGGCGCTCCCGCCGGCGACGTGGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCCGAGTTGCCGAGCTCCGGCGAGAGGTCCAACGCTACGACGTCTCCATTCTGTCGTTGCAGCACAAGGTGAAGAAGTTGGAGGAAGAGAGAGAACGAAACATGAAGGAGAATGACGCAGAACGAGATGAGAAACCAGATCTGGAAGACTCCAGGAAACCGGAAAACGACGAAAAAAACGGAGAAGAAGAAGACGAGCCCGAACGGGCGAGTTCCGAACCGGGGAGGCGGGTCGATGACGATGGAAATGATAATAGTAATAACAACAATAATAATACTAACAGCAATAACATTAAGCTTCGAACTGGGGACGAATCCGACCGGGAGAATCAGTCAGTTAATGAGTCCAATTCGACCGGTTCGAGATCTTTGGGAGACAAAACCGGTGAGGAAGATGTGAAGCATGAACCGCCTCCGGTTCATCCCGGTCCAAAAGAACCGGACCCGAGTGAGGAGAGAAAAGTGGAGGATTCCTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGAGGAGGGACAAGGGACAGCAGCGAGGTGCAGAGCTCGGCGAGCTTGACGAGGAAGAGGAAGACGCGGCAGAGGAAGAAGGTGTCCGGCGGCGGAGAGGAGACTCCGGAGAACGACGAGGTGGCCGTGAAATCAGAGCCGTTGGTTGGCCTACTGGAGTTGATCAAAGGACATGAAAACAGCTCATCGTTCGAGCGCCGTCTCGAAAGCCAGCATGAAACAGATGCATACAAAAGCATAGTGCGACAGCACGTGGACTTGGAAACCATACAAACCCGACTCCGAAACGGCTCCTACTCCTCCTGCACTCCCGCCTTCTTCCGTGACCTCCTTCTCCTCTTCACCAACGCCACCACCTTCTTCCCCAGAGACTCCGTCGAATCACGCACCGCCCACCGCCTCTGCCGCCTCGTCTCAGCCGAGATCAAGAACCACATCCCAACCCACCAACCCGACCCGAATCTTCCCCAGAACACCGATCATTCACTCCCACCACCACCACCACCACCACCACCACCACCCACATCATCATCATCACAAGCCAAGCCCGATTCTTCTTTGCTTTCCAAGCACAAAGCTTCTGCTCCCATATTGGTATGCCGGAAACGCACTTCAATCTCGGCCAAACCTTCCTCCGTAGCAGCTACCATTGGCCAAAAGGGTAGTGACCAGTTAAGCAGTGAGAAGAAACCAGCTTCGGATTCAAAACCACCCCAGAAGCCATCTTCGGTTTCTGAGGATTCAGATGAAGAGCCTCCTCCTCCTCTGCCGCCTAAGGTAAAGGAGAAGCCGGTGACCGGAGCAAGAAGCATGAGAAGAAGCAATAAAAACCTTGGTGGCGGCGCAGCCAACCCGAACAAGAAGCTTCAGTCCAGCAGTTCTACCCTGAAAGGAAGCTCTCCCAAATCAGATCACAAAAGCAAAGCAGCAGCAGCAGCTGCAGCATCAGAGGCATCTGTGTCTGACAAAAAGAGGAATGCAGCCGCAGATTTCTTGAAAAGGATAAAGAGAAACGGCCCGGCTGAGGCGACGAAGAGCAGTGGCGGTGGCGGCGGCGGAAGCCGAGGAGGTTTAGGAGGTAGTGGGAAAGAGCAGAAGAAAGTGATGAGTGGTGGGAAGAATGAAAAAGGAAAAGAGAGGGTACTGAGGCATAGTGGTGGGTCAGGGGATAAGAAAAGTGAGAACACTGAGAACAGCAATCAATCAAAGAGAAGTGTAGGGAGGCCTCCAAAGAAGAATGCAGAAAGTAATGCTTCAGTTTCTGCAAAACGTGGAAGGGAGAGTAGTAGTGGGAAGGATAAAAGACCCAAGAAACGAACTAGGAAGTAG 2193 0.5381 MEKHQNHHHHNPDNKKQQQQHHHHRQNHHQTWGTWEELLLGYAVNRHGFKDWDAVAMEIQNRTNLPHLLTTARNCEQKFLDLKRRFTAQCNDAVPEPTENGAPAGDVVDHVPWLDELRKLRVAELRREVQRYDVSILSLQHKVKKLEEERERNMKENDAERDEKPDLEDSRKPENDEKNGEEEDEPERASSEPGRRVDDDGNDNSNNNNNNTNSNNIKLRTGDESDRENQSVNESNSTGSRSLGDKTGEEDVKHEPPPVHPGPKEPDPSEERKVEDSSELRDSVAHSEGGGTRDSSEVQSSASLTRKRKTRQRKKVSGGGEETPENDEVAVKSEPLVGLLELIKGHENSSSFERRLESQHETDAYKSIVRQHVDLETIQTRLRNGSYSSCTPAFFRDLLLLFTNATTFFPRDSVESRTAHRLCRLVSAEIKNHIPTHQPDPNLPQNTDHSLPPPPPPPPPPPTSSSSQAKPDSSLLSKHKASAPILVCRKRTSISAKPSSVAATIGQKGSDQLSSEKKPASDSKPPQKPSSVSEDSDEEPPPPLPPKVKEKPVTGARSMRRSNKNLGGGAANPNKKLQSSSSTLKGSSPKSDHKSKAAAAAAASEASVSDKKRNAAADFLKRIKRNGPAEATKSSGGGGGGSRGGLGGSGKEQKKVMSGGKNEKGKERVLRHSGGSGDKKSENTENSNQSKRSVGRPPKKNAESNASVSAKRGRESSSGKDKRPKKRTRK 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2009 730 MobiDBLite consensus disorder prediction 315 329 - -
Dere07g2009 730 SMART bromo_6 129 435 IPR001487 GO:0005515
Dere07g2009 730 MobiDBLite consensus disorder prediction 680 713 - -
Dere07g2009 730 SUPERFAMILY Bromodomain 333 437 IPR036427 GO:0005515
Dere07g2009 730 CDD SANT 31 83 IPR001005 -
Dere07g2009 730 MobiDBLite consensus disorder prediction 531 545 - -
Dere07g2009 730 CDD Bromodomain 339 422 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 1 28 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 494 730 - -
Dere07g2009 730 SMART sant 28 85 IPR001005 -
Dere07g2009 730 MobiDBLite consensus disorder prediction 558 588 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 494 514 - -
Dere07g2009 730 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 17 730 - -
Dere07g2009 730 Gene3D - 300 439 IPR036427 GO:0005515
Dere07g2009 730 MobiDBLite consensus disorder prediction 289 305 - -
Dere07g2009 730 Pfam Bromodomain 340 419 IPR001487 GO:0005515
Dere07g2009 730 MobiDBLite consensus disorder prediction 446 466 - -
Dere07g2009 730 Pfam Myb-like DNA-binding domain 30 63 IPR001005 -
Dere07g2009 730 ProSiteProfiles Bromodomain profile. 344 416 IPR001487 GO:0005515
Dere07g2009 730 MobiDBLite consensus disorder prediction 611 628 - -
Dere07g2009 730 Coils Coil 129 163 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 148 202 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 148 330 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 434 482 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 656 679 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 203 219 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 1 30 - -
Dere07g2009 730 MobiDBLite consensus disorder prediction 244 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2009 Dere-ChrDere07 33392554 33398322 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere07g2009 Bromodomain 1.4e-10 No_clan