Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g2001 ATGAAATCCGGCCACGTGTCACAAGATATAGGGATTAGCTTCTTTCAACAACTCTCTCTCGAGCACTGTAATGAGATTCCTTCTTCGCAAAGTCACCATCTGTCGCCAAAAGCGAGAAAGATCGGAGGCGTTAAATGCGCGTTTAATTTGATTCGAGCTGATCTAGTTGTGGTTGGTGAACTGAATTTTGGATCAAGGCTTTGTTTGAGCAAGAATCCGTCAAAAAATTCTGAGGAGTGCTTGGAAACTGGATATTTTTTTCTGGTTGTTGTTGCATACAACATGTGGAGATTTAAGCCATTCATGCAGAAGGAGCCTGCCGGGCTTGAAGGCCGCTCTATAGATGTTGGCAGCCTTAAGGTAAATGTACAGAAGGCCATTGCTGAAGGGGGATTCTCTTGTGTCTACTTGGCTCGTGATGCTGTACATATGTCAAAGCAGTATGCTTTGAAGCACATAATATGCAATGATGAAGAATCACTTGAATTGGTAAAGAAGGAGATCTCCGTGATGAAGTCACTGAAAGGGCATCCCAATATTGTCACACTTTACGCACATACAATCTTTGATATGGGTAGGACAAAAGAAGCATTCCTTGTGATGGAATTTTGTGACAAGTCTCTAGTTAATGTGTTGGAAAGCCGAGGAGCTGGGTATTTTGATGAGAGGCAGGTTCTATTAATCTTCAGGGATGTATGCAATGCAGTTTTTGCTATGCACTGCCAATTCCCACCAATTGCTCACCGAGACTTGAAAGCTGAGAATCTTTTATTAGGCTCAGATGGCTTATGGAAATTATGTGATTTTGGGAGTACTTCCACCAATCACAAGCGTTTTGAGAAGCCAGAAGAAATGGGAATTGAGGAAGACAATATCAGGAAGCACACAACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAAGTGGACATTTGGGCACTTGGGTGTCTCCTTTTTCGCATATGCTACTTCAAAAGTGCGTTCGATGGAGAATCAAAATTGCAAGTCTTAAATGGAAACTATCGCATTCCAGATTTGCCTAAATACAGTTCATCCATGACAGACCTAATCAGAGACATGCTTCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTCAATGAGCAGTTACCGATTGATTTGCAGAAGTCATTACCTGACAGACCACCTGAATTGCCGTCTTCCAACAATCATGAAGGTGCCTCAAAGCCTGCAACTCAATCACCTCCAATGCCTCGTCGGAGTCCACCTCCCCCACCTGCATCTGGGGAAACTAAAAATTCATCACAGCCATCCCTTTCTGCGAGGGGAGGAAGAAGTGGAGGGCAGCTTGGTGTTTTCTGGTCCACTCTCCATGCAAAGGACTCATCTGTGTACGAGGAAAAGAGCAAACCGATATTTGATGAAGAACCATCTAGCCATCATATCTCAACAAAACCTGATAGAATTCGTCCAGACAACAATCAATTACCCAATGTTAGTACTAAAAAGGTGGATAACATACAAACTCAAAATGTAAAAATCAGTGCACATGGTAAATCAAACAAGCTTGATTCTGGATCTTCCAAGGACTTTGAAATAAACTTTTACCAGGACACAAATCTTGTTGGTGAGAGGCGAATGTCATCAAGTAAGGAGAACTCAGCCACCTCTGAAGACAAGGCTTTCAATTCATTTGTCGCTGAATTTGATACCAATAAGCTTAGCTCTGGATTCAGTGATAAAAAATGTGAAAAGGAAGAAGCATTAGAGGCTGAGGTGGAGAAACTTAGAGTGCAGCTGAAGGAAGCTAAGTTAGAGAAAGCTGAAATAACTTCCAAGTATGAGAAGCTTTCTGCCATCTGTCGATCTCAAAGGCAAGAGATACAGGATCTCAAGCAAGTTCTTGCCTCAAGAACTCCATCACCAAATAGAGAGGGCTTGAGAACTTCTCCTTCAGTTCCATCATCTGCAGCTACGCAGAGGGAGAAGGGTGGTGGGACACTTAGGGAACTAGAGCAAAATAAATCTGAAACGAAGAGTCCTACTTCAGAACCAAAGTCTTGGCAAGCTTTTGCAGAGGCACCTCAGCCACAGAAGTCTCTTTCAGCAGACAATAGAGCCAAATCTGTTACGACTAGAAAAACTCATCAAAACGATCTGCCTGCTCAACCAGCTTCTGATTTTGATACATGGGGTTTTGGAGCAGATAGCTTCACTGCTGTATCTGCTGGAAGCCCACAGATACCTAGACATTCTAGTACTGAAGGGAGTAATTCTCAGGTTTTTGGTAATGCTAAGACCTTTGAGAGCAAGTCAGTTTCTCAACCTGCTGGATGGGCTGGTTTTTAA 2373 0.4332 MKSGHVSQDIGISFFQQLSLEHCNEIPSSQSHHLSPKARKIGGVKCAFNLIRADLVVVGELNFGSRLCLSKNPSKNSEECLETGYFFLVVVAYNMWRFKPFMQKEPAGLEGRSIDVGSLKVNVQKAIAEGGFSCVYLARDAVHMSKQYALKHIICNDEESLELVKKEISVMKSLKGHPNIVTLYAHTIFDMGRTKEAFLVMEFCDKSLVNVLESRGAGYFDERQVLLIFRDVCNAVFAMHCQFPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSMTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPDRPPELPSSNNHEGASKPATQSPPMPRRSPPPPPASGETKNSSQPSLSARGGRSGGQLGVFWSTLHAKDSSVYEEKSKPIFDEEPSSHHISTKPDRIRPDNNQLPNVSTKKVDNIQTQNVKISAHGKSNKLDSGSSKDFEINFYQDTNLVGERRMSSSKENSATSEDKAFNSFVAEFDTNKLSSGFSDKKCEKEEALEAEVEKLRVQLKEAKLEKAEITSKYEKLSAICRSQRQEIQDLKQVLASRTPSPNREGLRTSPSVPSSAATQREKGGGTLRELEQNKSETKSPTSEPKSWQAFAEAPQPQKSLSADNRAKSVTTRKTHQNDLPAQPASDFDTWGFGADSFTAVSAGSPQIPRHSSTEGSNSQVFGNAKTFESKSVSQPAGWAGF 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g2001 790 MobiDBLite consensus disorder prediction 639 670 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 476 507 - -
Dere07g2001 790 CDD STKc_GAK_like 120 392 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 403 418 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 750 790 - -
Dere07g2001 790 Coils Coil 587 642 - -
Dere07g2001 790 Gene3D Transferase(Phosphotransferase) domain 1 105 399 - -
Dere07g2001 790 SUPERFAMILY Protein kinase-like (PK-like) 123 436 IPR011009 -
Dere07g2001 790 MobiDBLite consensus disorder prediction 673 687 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 639 736 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 396 455 - -
Dere07g2001 790 SMART serkin_6 121 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2001 790 MobiDBLite consensus disorder prediction 423 438 - -
Dere07g2001 790 FunFam probable serine/threonine-protein kinase DDB_G0280111 104 399 - -
Dere07g2001 790 MobiDBLite consensus disorder prediction 750 782 - -
Dere07g2001 790 ProSiteProfiles Protein kinase domain profile. 121 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2001 790 PANTHER SERINE/THREONINE PROTEIN KINASE 95 773 - -
Dere07g2001 790 Pfam Protein kinase domain 123 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g2001 790 MobiDBLite consensus disorder prediction 688 732 - -
Dere07g2001 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Dere07g2001 790 MobiDBLite consensus disorder prediction 476 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g2001 Dere-ChrDere07 33301335 33305920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g2001 120 386 CBL-interacting serine-threonine protein kinases AT5G45810 29.329 5.89e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dere07g2001 Pkinase 4.4e-41 CL0016