Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1986 ATGGATTATCTTCCATTTGAGCAGAGAGTGAAGGCTAGGGTTTTGCAGCAGAGAAGCAGGAGGCGGAAGAAAGAGATGGCCCCCTCGAAGCAGAGAACACCGAGAGTTACCAGGAACCCTGAATTGATCAGGGGAATCGGTAAGTACTCCAGGTCCCAGATGTACCACAAGAGGGGTCTCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTTCCTCGCCACGATCCTAAACCTAAGCCCGCAGCTCCGGCCGAGAAGCCCCCCAAGTTCTACCCTGCTGACGATGTCAAGAAGCCCCTCGTCAACAAGCGCAAGCCCAAACCTACTAAGCTCAGGGCCAGCATTACTCCGGGAACAGTATTGATACTTCTTGCTGGGAGATTCATGGGGAAGAGAGTAGTTTTTCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTCAAGATAAATGGGGTTCCTTTGAGACGCGTGAGCCAGTCTTATGTCATTGGGACATCCACCAAGGTGGATATCACTGGAGTTAATGTGGAAAAGTTTGATGACAAATACTTCGCTAAGCCAGTTGAGAAGAAGAAGAAAAAGGGAGAGGGTGAATTCTTTGAGTCAGAGAAGGAGGAGAAAAATGTGATCCCTCAAGAGAAGAAAGACGATCAGAAAGTTGTGGACACTGCATTGCTAAAGGCCATTGAGAGTGTTCCAGACTTGAAGGCTTACTTGGGTGCGAGGTTTTCTCTGAAGGCAGGCATGAAGCCACATGAGCTAGTCTTCTAA 780 0.491 MDYLPFEQRVKARVLQQRSRRRKKEMAPSKQRTPRVTRNPELIRGIGKYSRSQMYHKRGLWAIKAKNGGVFPRHDPKPKPAAPAEKPPKFYPADDVKKPLVNKRKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKVDITGVNVEKFDDKYFAKPVEKKKKKGEGEFFESEKEEKNVIPQEKKDDQKVVDTALLKAIESVPDLKAYLGARFSLKAGMKPHELVF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1986 259 MobiDBLite consensus disorder prediction 70 110 - -
Dere07g1986 259 MobiDBLite consensus disorder prediction 14 41 - -
Dere07g1986 259 SUPERFAMILY Translation proteins SH3-like domain 113 204 IPR008991 -
Dere07g1986 259 Pfam Ribosomal protein L6e 152 259 IPR000915 GO:0003735|GO:0005840|GO:0006412
Dere07g1986 259 CDD KOW_RPL6 107 259 IPR041997 -
Dere07g1986 259 Gene3D - 113 197 IPR014722 -
Dere07g1986 259 FunFam 60S ribosomal protein L6 113 198 - -
Dere07g1986 259 Pfam Ribosomal protein L6, N-terminal domain 29 87 IPR005568 GO:0003735|GO:0005840|GO:0006412
Dere07g1986 259 PANTHER 60S RIBOSOMAL PROTEIN L6 30 259 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1986 Dere-ChrDere07 32990655 32993806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1986 28 259 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.190 6.86e-126 355