Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1984 ATGAAGCTGGTAGTGGAGGTTATAGATGCTCATAATCTTACGCCCAGAGATGGCGAAGGATCAGCAAGTCCATTTGTAGAAGTAGACTTTGAAAACCAGCTGAGCAGAACCAGAACAATCCCAAAGAACCTGAACCCCATTTGGAATCACAAGCTGTTTTTTCATTTCAATCCAACCAAACCTTACCATCATCAAACAATCATAGTCTCGGTCTACAACGAGAGGAGACCTATTCCTGGTCGGAACTTCCTCGGACGAGTGAGAATTCCTTGCTCTAATCTTGTCAAGGAAGGTGAAGAAGTCTATCAGACTTTCCCACTAGAAAAGAAGTGGTTTTTCTCACACGCCAAGGGTGAGATTGGCCTGAAAGTTTACATAGCATCAGACTCCAAAACTATACCTCCATCAGAACTAGAAAAATCCTCATATCCTTCCACACTACCACAGGTACTGAAATCGACTAGTACTAGTGTTTCTCCTCCTCTTCATAGTACTCCTTCAGTCACAGAAAACAAAGACCTTACTGACAGAACATTAACAGCTATTGGCAAAGCAGAAGAAGCAGAGGAAGAGCCAGAAGAGTCCAAAGAGGAAAGAAGAGAACCTGCCACCCAACTGCACAAACATCAAATCAACATGCAACCTAGGATTACAATCATGAAACGACCACCTCGTACTCCGTCAACAATGCATCAAGTTCATCCTCAAACTCAACCTCAACCTCAACCTCAACCTCATCCTCATCCTCATCCTCATCCTCATGTTCATCCTCAAGTTCATATTCCTACCCGTGACAATGAAGACTACAATCTGAAGGACACCAACCCACAACTCGGTGAGCGGTGGCCAAATGGTGGAAGAGGGTGGATGAGTGGTGGTGTTAGTGGTGGTGAAAGGTACACAAGCACATATGACCTTGTCGAGCAGATGTATTATCTCTATGTTCGAGTCGTGAAGGCCAAAGATCTTCCTCCCGGTGCTGTCACTGCAAGCTGTGATCCTTATGTGGAAGTGAAGCTTGGGAACTATAAAGGAAGAACAAGGCACTTTGAGAAGAAGATGAACCCAGAGTGGAACCAAGTCTTTGCTTTCTCCAAAGACCGAATTCAATCCTCTGTTCTAGAGGTCTTTGTGAAGGATAGAGACATGGTGGGCAGAGATGATTACCTTGGAAGGGTGGTTTTTGACCTCAATGAGGTTCCAACAAGAGTTCCACCAGACAGCCCACTGGCTCCTCAATGGTATAGGCTCGAGGACTGGCGAGGTGAAGGGAAGGTAAGAGGTGAGATCATGCTTGCAGTATGGATGGGAACTCAAGCTGATGAAGCTTTCCCAGAAGCTTGGCATTCAGATGCTGCTTCTGTTTCTGGAGAAGGTGTTTTCAATATCAGATCAAAGGTTTATGTGTCACCAAAACTATGGTATCTCAGGGTCAATGTAATTGAAGCTCAAGATGTGATACCCAGTGACAGAAATCGCCTACCAGAAGTCTTCGTGAAAGCTCAGGTGGGAGGCCAGGTACTGGGGACAAAGATATGCCCAACTAGAACAACCACTCCACTTTGGAATGAAGATTTGGTTTTTGTGGCAGCTGAACCATTTGAGGAACAATTGATGATCACAGTGGAGGATCGCGTGCATCCTTCAAGAGACGAGGTACTTGGGAAGATAACCTTGCCATTGACCCTCTTCGAGAAGCGACTAGACCACAGGCCTGTTCATTCTCGCTGGTTCAATCTTGAGAAGTTTGGTTTTGGAGCACTGGAAGGTGATAGGAGGATGGAGCACAAGTTTTCAAGTAGGATTCACCTAAGAGTTTGTCTTGAAGGTGGATACCATGTGCTAGATGAATCCACCATGTATATTAGTGATCAAAGACCTACAGCAAGACAGCTATGGAAGCAGCCTATTGGGATACTTGAAGTTGGAATTCTAGGGGCACAGGGGCTTCTCCCAATGAAGATGAAGGATGGCCGAGGAAGCACAGATGCATACTGTGTTGCCAAATATGGCCAGAAATGGGTCAGAACCAGAACAATCCTTGACACCTTTAGTCCCAAATGGAATGAACAATACACCTGGGAGGTTTATGATCCTTGCACTGTGATCACACTCGGGGTGTTCGACAACTGCCATCTGGGTGCAGGGAGTGAAAAAGCTCAAGGAGCACGTGATTCACGAATCGGGAAGGTCAGGATTCGGCTTTCAACCTTGGAGGCTCATAGAATCTACACTCATTCATACCCACTTCTTGTTCTACACCCACATGGAGTCAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACTACCCTCTCACTAGCTAACATGGTTTACATCTATGGCCATCCCTTGCTTCCCAAGATGCATTACTTACACCCTTTCACAGTGAACCAAGTAGAAAACCTAAGGTACCAAGCCATGAATATAGTAGCTATGAGGCTCGGCCGGGCTGAACCATCTCTAAGAAAGGAGGTGGTGGAGTACATGCTGGATGTTGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCTAATTTCTTTCGCATAATGTCCCTCTTCTCCGGTATGATCTCAATGGGAAGATGGTTCAGTGATGTTGGCCATTGGAAGAACCCTATCACAACCATTCTAGTTCACATCCTTTTTCTGATACTGATTTGGTACCCAGAATTGATCCTCCCAACTCTGTTTCTCTACATGTTCTTGATCGGTCTCTGGAACTATCGGTTCCGCCCAAGACACCCACCTCACATGGATACTAAGCTCTCTTGGGCAGAAGCTGTACACCCAGATGAACTAGATGAAGAGTTTGACACTTTCCCAACATCTAGATCACCTGATGTGGTGAGAATGAGGTATGATAGGCTTAGAAGTGTTGCTGGAAGGATTCAGACAGTGGTTGGGGATATAGCTACGCAGGGTGAGAGGTTTCAGTCTCTGCTAAGCTGGAGGGACCCAAGAGCAACTGGCCTCTTTGTGGTGTTTAGCTTATGTGCAGCAGTAGTACTGTACGCTACCCCATTCAAAGTCGTAGCTTTGGCCACTGGTTTGCATTGTTTACGCCACCCAAGGTTTAGAAGCAAGCTGCCTTCTGTACCCAGTAATTTCTTCAAGAGGCTCCCAGCTCGAACAGATAGTTTACTGTAA 3153 0.4592 MKLVVEVIDAHNLTPRDGEGSASPFVEVDFENQLSRTRTIPKNLNPIWNHKLFFHFNPTKPYHHQTIIVSVYNERRPIPGRNFLGRVRIPCSNLVKEGEEVYQTFPLEKKWFFSHAKGEIGLKVYIASDSKTIPPSELEKSSYPSTLPQVLKSTSTSVSPPLHSTPSVTENKDLTDRTLTAIGKAEEAEEEPEESKEERREPATQLHKHQINMQPRITIMKRPPRTPSTMHQVHPQTQPQPQPQPHPHPHPHPHVHPQVHIPTRDNEDYNLKDTNPQLGERWPNGGRGWMSGGVSGGERYTSTYDLVEQMYYLYVRVVKAKDLPPGAVTASCDPYVEVKLGNYKGRTRHFEKKMNPEWNQVFAFSKDRIQSSVLEVFVKDRDMVGRDDYLGRVVFDLNEVPTRVPPDSPLAPQWYRLEDWRGEGKVRGEIMLAVWMGTQADEAFPEAWHSDAASVSGEGVFNIRSKVYVSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAQVGGQVLGTKICPTRTTTPLWNEDLVFVAAEPFEEQLMITVEDRVHPSRDEVLGKITLPLTLFEKRLDHRPVHSRWFNLEKFGFGALEGDRRMEHKFSSRIHLRVCLEGGYHVLDESTMYISDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDGRGSTDAYCVAKYGQKWVRTRTILDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGAGSEKAQGARDSRIGKVRIRLSTLEAHRIYTHSYPLLVLHPHGVKKMGELQLAVRFTTLSLANMVYIYGHPLLPKMHYLHPFTVNQVENLRYQAMNIVAMRLGRAEPSLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLFSGMISMGRWFSDVGHWKNPITTILVHILFLILIWYPELILPTLFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSPDVVRMRYDRLRSVAGRIQTVVGDIATQGERFQSLLSWRDPRATGLFVVFSLCAAVVLYATPFKVVALATGLHCLRHPRFRSKLPSVPSNFFKRLPARTDSLL 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1984 1050 FunFam C2 domain-containing protein 461 608 - -
Dere07g1984 1050 Gene3D C2 domain 635 774 IPR035892 -
Dere07g1984 1050 CDD C2D_MCTP_PRT_plant 639 767 IPR047255 -
Dere07g1984 1050 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 638 772 IPR035892 -
Dere07g1984 1050 CDD C2A_MCTP_PRT_plant 2 128 - -
Dere07g1984 1050 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 2 1050 IPR047259 -
Dere07g1984 1050 ProSiteProfiles C2 domain profile. 616 748 IPR000008 -
Dere07g1984 1050 FunFam C2 domain-containing protein 621 774 - -
Dere07g1984 1050 MobiDBLite consensus disorder prediction 135 176 - -
Dere07g1984 1050 MobiDBLite consensus disorder prediction 135 284 - -
Dere07g1984 1050 CDD C2C_MCTP_PRT_plant 475 627 IPR047258 -
Dere07g1984 1050 Pfam C2 domain 2 107 IPR000008 -
Dere07g1984 1050 Pfam C2 domain 312 415 IPR000008 -
Dere07g1984 1050 Pfam C2 domain 638 750 IPR000008 -
Dere07g1984 1050 Pfam C2 domain 474 580 IPR000008 -
Dere07g1984 1050 SMART C2_3c 2 103 IPR000008 -
Dere07g1984 1050 SMART C2_3c 475 575 IPR000008 -
Dere07g1984 1050 SMART C2_3c 639 747 IPR000008 -
Dere07g1984 1050 SMART C2_3c 312 409 IPR000008 -
Dere07g1984 1050 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Dere07g1984 1050 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 311 451 IPR035892 -
Dere07g1984 1050 CDD C2B_MCTP_PRT_plant 312 438 IPR047257 -
Dere07g1984 1050 ProSiteProfiles C2 domain profile. 455 578 IPR000008 -
Dere07g1984 1050 FunFam C2 domain-containing protein 307 453 - -
Dere07g1984 1050 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 474 629 IPR035892 -
Dere07g1984 1050 Pfam Plant phosphoribosyltransferase C-terminal 895 1050 IPR013583 -
Dere07g1984 1050 Gene3D C2 domain 307 454 IPR035892 -
Dere07g1984 1050 Gene3D C2 domain 1 146 IPR035892 -
Dere07g1984 1050 Gene3D C2 domain 462 608 IPR035892 -
Dere07g1984 1050 ProSiteProfiles C2 domain profile. 294 415 IPR000008 -
Dere07g1984 1050 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 141 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1984 Dere-ChrDere07 32986921 32990073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1984 2 1050 Lipid Metabolism Gene Families AT5G48060 69.413 0.0 1504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1984 07 32986921 32990073 Dere07g1984 07 32986921 32990073 ECH