Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1977 ATGGAGAGGTTCAAGCAACTTCAGCAAGAGCAGGAGAAGGACAAAAATGCCAAATTAGAGGAGACTAAACCAATTAAAATTGTTTCTGGGTCTCTGACTCCTAACCTGTCCATCAAAAAAGCCTCTGTGGACTCCAAGGCTAACGATACACAGAAAACTTCCCAGGCTGGTTCCAGTGGCAAACTTGCTTTTAGTTTAAAACAGAAGTCAAAATTAGTTCCACCACCTGTTAAATTAAGTGCCGAAGATGATGAGGAAGAAACAAATGATGGTGATGCTTCAAGTGATGTACCATCAAAACGGCTGAAGTTGGATCAAGAGGGTCGCACTGAGCAATCTTTAAGAACACTTGAAGTTGCACCACCTTCCCCAAGTGACCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAGTTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGACGAGAAATGTGCTGATTACAAATATTACCAATATTGGCTTGCTCAAGAGGAAAAGGCTCTTGCTCAGTCAAGGGAATCACGGGTATCTCATAATGGTGGTACAAGCACTTCATCTTCCAAACCAACAATTGGTTCTCAGAGAACATCTCAGCAGCATTCAACCTACCAAATTCCTGCATCTGCTTTATATGAGAGTGCTGATGAGCCAGCTGCATTATCAAATGCTGATTCATTAGCACGAATGGAGTTCTTCATGAAGAAAGCTGCCCAGGAAGAGAAGATGAGACAACCTAAGCAATCAAAAGATGAGATGCCACCTCCAGCTTCCCTTCAAGCTTCTGCAAAAAAGGGACATCACATGGGTGATTACATCCCCCCAGAAGAACTTGAGAAGTTCTTGGCTTCCTGTAATGATGCAGCAGCACAGAGAGCTGCCAGGGAAGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGGCACAAGCTCTTGTCAAAAATGGGTTGGAAGGAAGGCGAGGGTCTGGGTAGCTCCAGGAAGGGTATATCAGATCCAATAATGGCAGGCAATGTTAAGATGAATAATTTGGGAGTTGGTGCTCAGCATCCAGGGGAGGTGACTTCTGAGGATGATATATATGAGCAGTACAAGAAGCGGATGATGCTTGGTTATCGATACAGACCCAACCCTCTGAATAATCCTCGCAAGGCTTATTATTGA 1218 0.4343 MERFKQLQQEQEKDKNAKLEETKPIKIVSGSLTPNLSIKKASVDSKANDTQKTSQAGSSGKLAFSLKQKSKLVPPPVKLSAEDDEEETNDGDASSDVPSKRLKLDQEGRTEQSLRTLEVAPPSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYQYWLAQEEKALAQSRESRVSHNGGTSTSSSKPTIGSQRTSQQHSTYQIPASALYESADEPAALSNADSLARMEFFMKKAAQEEKMRQPKQSKDEMPPPASLQASAKKGHHMGDYIPPEELEKFLASCNDAAAQRAAREAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRKGISDPIMAGNVKMNNLGVGAQHPGEVTSEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1977 405 MobiDBLite consensus disorder prediction 255 284 - -
Dere07g1977 405 MobiDBLite consensus disorder prediction 42 130 - -
Dere07g1977 405 Coils Coil 1 21 - -
Dere07g1977 405 MobiDBLite consensus disorder prediction 1 22 - -
Dere07g1977 405 MobiDBLite consensus disorder prediction 191 220 - -
Dere07g1977 405 MobiDBLite consensus disorder prediction 93 112 - -
Dere07g1977 405 Pfam G-patch domain 323 366 IPR000467 GO:0003676
Dere07g1977 405 ProSiteProfiles G-patch domain profile. 322 369 IPR000467 GO:0003676
Dere07g1977 405 ProSiteProfiles SURP motif repeat profile. 132 175 IPR000061 GO:0003723|GO:0006396
Dere07g1977 405 MobiDBLite consensus disorder prediction 186 220 - -
Dere07g1977 405 SMART surpneu2 130 184 IPR000061 GO:0003723|GO:0006396
Dere07g1977 405 MobiDBLite consensus disorder prediction 42 65 - -
Dere07g1977 405 SUPERFAMILY Surp module (SWAP domain) 114 183 IPR035967 GO:0003723|GO:0006396
Dere07g1977 405 SMART G-patch_5 320 367 IPR000467 GO:0003676
Dere07g1977 405 Pfam Surp module 131 180 IPR000061 GO:0003723|GO:0006396
Dere07g1977 405 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 279 405 IPR040169 -
Dere07g1977 405 MobiDBLite consensus disorder prediction 1 25 - -
Dere07g1977 405 Gene3D Surp module 103 189 IPR035967 GO:0003723|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1977 Dere-ChrDere07 32930980 32935620 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1977 313 378 C2H2 Transcription Factor Family AT5G26610 43.284 2.89e-09 56.2