Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1971 ATGGTTCAGAAGACGGAGAAGGAAGAGACCGAGTTCAAGGTTCCTGAAACCATCACCCCCTGCGTCAACAACTGTGGAGTCACTGGTAATCCGGCCACGAACAACATGTGCCAGAAATGCTTCACCGCCGCCGCCACCGCCGCCGCAGCAACCTCCTCCACCGGGATTTCAGCGCCTTCTAAATTTGCCGACGACAAATCTTCTAGATCCACCGCGTCTCGCTCGCCGAAGAGGTCGTACCCTCCCGACGAGGAGCCGATGCAGAATCCAACGCCAGATCGGACGAAATCGGACGCAACGACGCCGTCCGAGGCTAAGCGGGTGGTGAATCGATGCTCTGGATGCAGAAGGAAGGTCGGGTTGACCGGATTCCGGTGCCGGTGCGGAGAGCTGTTCTGTGCCGAACACCGGTATTCTGATCGCCACGATTGCAGCTACGACTACAAAGCCGCCGGACGCGAGGCCATAGCGAGGGAAAATCCGGTGATAAAAGCTGCCAAGATCGTGAAGGTTTGA 516 0.5775 MVQKTEKEETEFKVPETITPCVNNCGVTGNPATNNMCQKCFTAAATAAAATSSTGISAPSKFADDKSSRSTASRSPKRSYPPDEEPMQNPTPDRTKSDATTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIKAAKIVKV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1971 171 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Dere07g1971 171 Pfam AN1-like Zinc finger 112 149 IPR000058 GO:0008270
Dere07g1971 171 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Dere07g1971 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 170 - -
Dere07g1971 171 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 84 - -
Dere07g1971 171 Gene3D - 3 79 - -
Dere07g1971 171 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Dere07g1971 171 FunFam Zinc finger AN1-type containing 6 86 167 - -
Dere07g1971 171 MobiDBLite consensus disorder prediction 52 66 - -
Dere07g1971 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 50 - -
Dere07g1971 171 MobiDBLite consensus disorder prediction 52 103 - -
Dere07g1971 171 Gene3D - 87 157 IPR035896 -
Dere07g1971 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Dere07g1971 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Dere07g1971 171 SUPERFAMILY AN1-like Zinc finger 96 165 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1971 Dere-ChrDere07 32850422 32850937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1971 8 171 C2H2 Transcription Factor Family AT3G52800 39.286 7.01e-33 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1971 07 32850422 32850937 Dere07g1971 07 32850422 32850937 ECH